Top 10 genes with highest correlation to Rv0461/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3448/eccD4 | (cc=0.5455) | info on Rv3448/eccD4 |
| Rv1429/- | (cc=0.5174) | info on Rv1429/- |
| Rv0419/lpqM | (cc=0.5032) | info on Rv0419/lpqM |
| Rv1287/- | (cc=0.4909) | info on Rv1287/- |
| Rv2613c/- | (cc=0.4454) | info on Rv2613c/- |
| Rv3058c/- | (cc=0.442) | info on Rv3058c/- |
| Rv3060c/- | (cc=0.4415) | info on Rv3060c/- |
| Rv1291c/- | (cc=0.433) | info on Rv1291c/- |
| Rv1171/- | (cc=0.4315) | info on Rv1171/- |
| Rv0837c/- | (cc=0.4289) | info on Rv0837c/- |
Correlation of Rv0461/- with Rv3058c/-
Normalized LFCs for Rv0461/-:
(description and provenance of datasets)
| Rv0461/- | Rv3058c/- | |
| Fe_supp_jason_reseq | 0.341 | -0.339 |
| low_pH_jason_reseq | 0.027 | -1.275 |
| NO_jason_reseq | 0.15 | -1.42 |
| B6_jason_reseq | 0.173 | -1.367 |
| MHCII_jason_reseq | 0.809 | -0.287 |
| Isoniazid02 | -0.893 | -2.551 |
| Rifampicin4 | 0.942 | -1.375 |
| Ethambutol3 | 0.61 | 1.008 |
| Meropenem3 | -0.132 | -0.89 |
| Vancomycin16 | -0.817 | -1.971 |
| Rv2680_day32 | 0.367 | -1.059 |
| H37Rv_KO_MarP | 1.28 | 2.314 |
| hypoxia_3wks | -0.096 | -0.367 |
| hypoxia_6wks | -0.328 | -0.134 |
| glycerol | 0.255 | -1.219 |
| cholesterol | 0.336 | -2.073 |
| AJ | 0.077 | 0.255 |
| Bibs02 | -0.519 | -1.526 |
| Bibs02c | 0.047 | -1.629 |
| BL6 | -0.569 | -2.223 |
| BL6a | 0.07 | -1.871 |
| BXD01 | -0.041 | -2.739 |
| BXD010 | -0.247 | -2.712 |
| BXD011 | -0.224 | -2.487 |
| BXD03 | -0.152 | -1.704 |
| BXD04 | 0.138 | -2.414 |
| BXD05 | -0.264 | -2.911 |
| BXD06 | -0.579 | -3.679 |
| BXD07 | -0.047 | -3.23 |
| BXD08 | 0.559 | -1.966 |
| BXD09 | -0.175 | -4.27 |
| CAST | -0.309 | 0.46 |
| CCcont | -0.248 | -0.791 |
| DS01 | -0.214 | -1.879 |
| DS02 | -0.03 | -2.874 |
| DS04 | 0.306 | -3.405 |
| DS0c | -0.093 | -2.72 |
| GP01 | -0.795 | -2.006 |
| GP02 | 0.389 | -2.73 |
| GP0c | -0.365 | -3.106 |
| NOD | -0.05 | 0.672 |
| NZO | -0.056 | -0.623 |
| PWK | -0.438 | 0.51 |
| H37Rv_KO_CtpC | 0.248 | -0.211 |
| H37Rv_KO_CtpD | -0.111 | -1.019 |
| H37Rv_KO_Rv1272 | -0.71 | -2.109 |
| H37Rv_KO_SugABC | -0.066 | -3.448 |
| H37Rv_KO_MbtN | -0.487 | -2.442 |
| Trans05 | -0.301 | -2.637 |
| macrophage_unactivated | 0.698 | -1.231 |
| IL1 | -0.133 | -1.744 |
| Rapamycin | 0.249 | -1.66 |
| Tcell | 0.156 | -0.873 |
| GMCSF | 0.573 | -1.164 |
| IFNab | 0.221 | -3.516 |
| IFNg | 0.174 | -1.625 |
| IFNg_GMCSF1 | -0.214 | -1.91 |
| Rv1432_day32 | 0.305 | -2.632 |
| Rv1565c_day32 | 0.938 | 0.069 |
| secA2_input | 0.066 | 0.609 |
| delta_Rv3594 | 0.278 | -1.138 |
| delta_Rv3717 | 0.576 | -2.022 |
| delta_Rv3811 | 0.247 | -1.553 |
| delta_Rv0954 | 1.28 | 0.774 |
| PonA1 | 1.09 | 2.176 |
| EccD1_KO | 0.148 | -0.398 |
| EspI_KO | 0.359 | -0.22 |
| PE35_KO | -0.099 | 0.831 |
| PPE68_KO | 0.154 | 0.666 |
| glycerol2 | 0.633 | 4.618 |
| lignocerate | 0.017 | 2.532 |
| oleate | 0.645 | 0.679 |
| phosphatidylcholine | 0.426 | 5.238 |
| acetate | 0.175 | 0.53 |
| glucAc | 0.216 | -0.159 |
| Rv0950ko | 0.051 | 0.362 |
| Rv1096ko | 0.271 | -0.09 |
| Rv3684ko | 0.95 | 0.282 |
| delta_otsA_trehalose | -0.165 | -0.217 |