Top 10 genes with highest correlation to Rv0461/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3448/eccD4 | (cc=0.5455) | info on Rv3448/eccD4 |
| Rv1429/- | (cc=0.5174) | info on Rv1429/- |
| Rv0419/lpqM | (cc=0.5032) | info on Rv0419/lpqM |
| Rv1287/- | (cc=0.4909) | info on Rv1287/- |
| Rv2613c/- | (cc=0.4454) | info on Rv2613c/- |
| Rv3058c/- | (cc=0.442) | info on Rv3058c/- |
| Rv3060c/- | (cc=0.4415) | info on Rv3060c/- |
| Rv1291c/- | (cc=0.433) | info on Rv1291c/- |
| Rv1171/- | (cc=0.4315) | info on Rv1171/- |
| Rv0837c/- | (cc=0.4289) | info on Rv0837c/- |
Correlation of Rv0461/- with Rv1287/-
Normalized LFCs for Rv0461/-:
(description and provenance of datasets)
| Rv0461/- | Rv1287/- | |
| Fe_supp_jason_reseq | 0.341 | 2.9 |
| low_pH_jason_reseq | 0.027 | 0.323 |
| NO_jason_reseq | 0.15 | -0.583 |
| B6_jason_reseq | 0.173 | 0.571 |
| MHCII_jason_reseq | 0.809 | 0.098 |
| Isoniazid02 | -0.893 | 0.805 |
| Rifampicin4 | 0.942 | -0.374 |
| Ethambutol3 | 0.61 | 0.822 |
| Meropenem3 | -0.132 | 0.633 |
| Vancomycin16 | -0.817 | -0.31 |
| Rv2680_day32 | 0.367 | -2.282 |
| H37Rv_KO_MarP | 1.28 | 0.24 |
| hypoxia_3wks | -0.096 | -2.999 |
| hypoxia_6wks | -0.328 | -2.714 |
| glycerol | 0.255 | -0.66 |
| cholesterol | 0.336 | 2.591 |
| AJ | 0.077 | -1.44 |
| Bibs02 | -0.519 | -0.309 |
| Bibs02c | 0.047 | -0.64 |
| BL6 | -0.569 | -2.144 |
| BL6a | 0.07 | -2.04 |
| BXD01 | -0.041 | -2.037 |
| BXD010 | -0.247 | -1.759 |
| BXD011 | -0.224 | -2.084 |
| BXD03 | -0.152 | -1.284 |
| BXD04 | 0.138 | -1.934 |
| BXD05 | -0.264 | -1.929 |
| BXD06 | -0.579 | -1.914 |
| BXD07 | -0.047 | -1.315 |
| BXD08 | 0.559 | -1.827 |
| BXD09 | -0.175 | -2.409 |
| CAST | -0.309 | -1.779 |
| CCcont | -0.248 | -0.729 |
| DS01 | -0.214 | -0.772 |
| DS02 | -0.03 | -0.758 |
| DS04 | 0.306 | -0.593 |
| DS0c | -0.093 | -0.069 |
| GP01 | -0.795 | -1.865 |
| GP02 | 0.389 | -1.654 |
| GP0c | -0.365 | -2.455 |
| NOD | -0.05 | -1.886 |
| NZO | -0.056 | -2.419 |
| PWK | -0.438 | -1.391 |
| H37Rv_KO_CtpC | 0.248 | 0.872 |
| H37Rv_KO_CtpD | -0.111 | -0.683 |
| H37Rv_KO_Rv1272 | -0.71 | -1.513 |
| H37Rv_KO_SugABC | -0.066 | -1.251 |
| H37Rv_KO_MbtN | -0.487 | -1.062 |
| Trans05 | -0.301 | -1.721 |
| macrophage_unactivated | 0.698 | -0.12 |
| IL1 | -0.133 | -1.967 |
| Rapamycin | 0.249 | -0.761 |
| Tcell | 0.156 | 0.358 |
| GMCSF | 0.573 | -0.776 |
| IFNab | 0.221 | 0.435 |
| IFNg | 0.174 | -1.179 |
| IFNg_GMCSF1 | -0.214 | -1.225 |
| Rv1432_day32 | 0.305 | -0.787 |
| Rv1565c_day32 | 0.938 | 3.074 |
| secA2_input | 0.066 | 0.023 |
| delta_Rv3594 | 0.278 | 2.232 |
| delta_Rv3717 | 0.576 | 0.81 |
| delta_Rv3811 | 0.247 | 0.779 |
| delta_Rv0954 | 1.28 | 4.017 |
| PonA1 | 1.09 | 1.101 |
| EccD1_KO | 0.148 | 1.151 |
| EspI_KO | 0.359 | 2.321 |
| PE35_KO | -0.099 | 1.473 |
| PPE68_KO | 0.154 | 2.342 |
| glycerol2 | 0.633 | -0.43 |
| lignocerate | 0.017 | 0.675 |
| oleate | 0.645 | -0.603 |
| phosphatidylcholine | 0.426 | -0.043 |
| acetate | 0.175 | 0.025 |
| glucAc | 0.216 | 0.122 |
| Rv0950ko | 0.051 | -0.045 |
| Rv1096ko | 0.271 | 0.353 |
| Rv3684ko | 0.95 | 1.484 |
| delta_otsA_trehalose | -0.165 | 1.312 |