Top 10 genes with highest correlation to Rv0461/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3448/eccD4 | (cc=0.5455) | info on Rv3448/eccD4 |
| Rv1429/- | (cc=0.5174) | info on Rv1429/- |
| Rv0419/lpqM | (cc=0.5032) | info on Rv0419/lpqM |
| Rv1287/- | (cc=0.4909) | info on Rv1287/- |
| Rv2613c/- | (cc=0.4454) | info on Rv2613c/- |
| Rv3058c/- | (cc=0.442) | info on Rv3058c/- |
| Rv3060c/- | (cc=0.4415) | info on Rv3060c/- |
| Rv1291c/- | (cc=0.433) | info on Rv1291c/- |
| Rv1171/- | (cc=0.4315) | info on Rv1171/- |
| Rv0837c/- | (cc=0.4289) | info on Rv0837c/- |
Correlation of Rv0461/- with Rv3448/eccD4
Normalized LFCs for Rv0461/-:
(description and provenance of datasets)
| Rv0461/- | Rv3448/eccD4 | |
| Fe_supp_jason_reseq | 0.341 | -0.796 |
| low_pH_jason_reseq | 0.027 | -0.294 |
| NO_jason_reseq | 0.15 | -0.533 |
| B6_jason_reseq | 0.173 | -0.165 |
| MHCII_jason_reseq | 0.809 | 0.725 |
| Isoniazid02 | -0.893 | 0.185 |
| Rifampicin4 | 0.942 | 0.558 |
| Ethambutol3 | 0.61 | 0.609 |
| Meropenem3 | -0.132 | 0.103 |
| Vancomycin16 | -0.817 | 0.546 |
| Rv2680_day32 | 0.367 | 0.449 |
| H37Rv_KO_MarP | 1.28 | 0.174 |
| hypoxia_3wks | -0.096 | -0.148 |
| hypoxia_6wks | -0.328 | 0.038 |
| glycerol | 0.255 | 0.0 |
| cholesterol | 0.336 | -0.183 |
| AJ | 0.077 | -0.202 |
| Bibs02 | -0.519 | -0.97 |
| Bibs02c | 0.047 | -0.182 |
| BL6 | -0.569 | -0.967 |
| BL6a | 0.07 | -0.416 |
| BXD01 | -0.041 | -0.331 |
| BXD010 | -0.247 | -0.654 |
| BXD011 | -0.224 | -0.403 |
| BXD03 | -0.152 | -0.717 |
| BXD04 | 0.138 | -0.68 |
| BXD05 | -0.264 | -0.687 |
| BXD06 | -0.579 | -0.734 |
| BXD07 | -0.047 | -0.194 |
| BXD08 | 0.559 | -0.186 |
| BXD09 | -0.175 | -0.514 |
| CAST | -0.309 | -0.517 |
| CCcont | -0.248 | -0.521 |
| DS01 | -0.214 | -0.33 |
| DS02 | -0.03 | -0.106 |
| DS04 | 0.306 | 0.0 |
| DS0c | -0.093 | 0.443 |
| GP01 | -0.795 | -0.715 |
| GP02 | 0.389 | 0.248 |
| GP0c | -0.365 | -0.614 |
| NOD | -0.05 | -0.376 |
| NZO | -0.056 | -0.147 |
| PWK | -0.438 | -0.718 |
| H37Rv_KO_CtpC | 0.248 | 0.019 |
| H37Rv_KO_CtpD | -0.111 | 0.195 |
| H37Rv_KO_Rv1272 | -0.71 | -1.797 |
| H37Rv_KO_SugABC | -0.066 | 0.011 |
| H37Rv_KO_MbtN | -0.487 | -0.231 |
| Trans05 | -0.301 | -0.312 |
| macrophage_unactivated | 0.698 | -0.691 |
| IL1 | -0.133 | -0.727 |
| Rapamycin | 0.249 | 0.267 |
| Tcell | 0.156 | -0.714 |
| GMCSF | 0.573 | -0.718 |
| IFNab | 0.221 | 0.2 |
| IFNg | 0.174 | -0.313 |
| IFNg_GMCSF1 | -0.214 | -1.031 |
| Rv1432_day32 | 0.305 | 1.063 |
| Rv1565c_day32 | 0.938 | -0.172 |
| secA2_input | 0.066 | -0.197 |
| delta_Rv3594 | 0.278 | 0.714 |
| delta_Rv3717 | 0.576 | 0.97 |
| delta_Rv3811 | 0.247 | 0.504 |
| delta_Rv0954 | 1.28 | 1.089 |
| PonA1 | 1.09 | 0.466 |
| EccD1_KO | 0.148 | -0.812 |
| EspI_KO | 0.359 | 0.445 |
| PE35_KO | -0.099 | -0.443 |
| PPE68_KO | 0.154 | 0.0 |
| glycerol2 | 0.633 | 0.688 |
| lignocerate | 0.017 | 0.447 |
| oleate | 0.645 | 0.759 |
| phosphatidylcholine | 0.426 | 0.709 |
| acetate | 0.175 | -0.417 |
| glucAc | 0.216 | -0.234 |
| Rv0950ko | 0.051 | -0.504 |
| Rv1096ko | 0.271 | 1.348 |
| Rv3684ko | 0.95 | 0.861 |
| delta_otsA_trehalose | -0.165 | -0.412 |