Top 10 genes with highest correlation to Rv0460/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1770/- | (cc=0.4837) | info on Rv1770/- |
| Rv0358/- | (cc=0.4363) | info on Rv0358/- |
| Rv0912/- | (cc=0.4316) | info on Rv0912/- |
| Rv2829c/vapC22 | (cc=0.4269) | info on Rv2829c/vapC22 |
| Rv3886c/mycP2 | (cc=0.425) | info on Rv3886c/mycP2 |
| Rv2679/echA15 | (cc=0.4204) | info on Rv2679/echA15 |
| Rv3032A/- | (cc=0.405) | info on Rv3032A/- |
| Rv1219c/- | (cc=0.4014) | info on Rv1219c/- |
| Rv1664/pks9 | (cc=0.3981) | info on Rv1664/pks9 |
| Rv0077c/- | (cc=0.3975) | info on Rv0077c/- |
Correlation of Rv0460/- with Rv3032A/-
Normalized LFCs for Rv0460/-:
(description and provenance of datasets)
| Rv0460/- | Rv3032A/- | |
| Fe_supp_jason_reseq | 0.136 | -1.372 |
| low_pH_jason_reseq | -0.765 | -1.169 |
| NO_jason_reseq | 1.425 | -0.698 |
| B6_jason_reseq | -0.772 | -0.904 |
| MHCII_jason_reseq | 0.379 | 0.135 |
| Isoniazid02 | 0.118 | -0.288 |
| Rifampicin4 | 0.856 | 0.208 |
| Ethambutol3 | 0.358 | 0.282 |
| Meropenem3 | 0.867 | 1.174 |
| Vancomycin16 | -1.011 | 0.172 |
| Rv2680_day32 | -0.121 | 1.038 |
| H37Rv_KO_MarP | 1.335 | 0.696 |
| hypoxia_3wks | 0.108 | 0.207 |
| hypoxia_6wks | 0.0 | -0.958 |
| glycerol | 1.062 | 1.346 |
| cholesterol | 0.321 | 0.988 |
| AJ | 2.649 | -0.182 |
| Bibs02 | 0.034 | -0.629 |
| Bibs02c | -1.399 | 0.108 |
| BL6 | 1.974 | -0.028 |
| BL6a | -0.326 | -0.522 |
| BXD01 | 0.248 | -0.877 |
| BXD010 | 2.069 | 0.937 |
| BXD011 | -0.564 | -0.276 |
| BXD03 | -0.522 | -0.552 |
| BXD04 | 0.33 | -1.547 |
| BXD05 | 1.098 | -0.886 |
| BXD06 | 0.19 | -0.217 |
| BXD07 | 0.448 | -0.287 |
| BXD08 | 0.315 | -1.1 |
| BXD09 | 0.568 | -0.088 |
| CAST | -0.649 | -0.035 |
| CCcont | 1.319 | 0.034 |
| DS01 | -0.091 | 0.438 |
| DS02 | 0.764 | 0.562 |
| DS04 | 0.93 | -0.836 |
| DS0c | -0.899 | -0.204 |
| GP01 | 3.028 | 0.344 |
| GP02 | 1.475 | 0.354 |
| GP0c | 0.785 | 0.521 |
| NOD | -1.422 | -0.659 |
| NZO | 0.442 | 0.504 |
| PWK | 0.374 | -0.202 |
| H37Rv_KO_CtpC | 0.946 | -0.646 |
| H37Rv_KO_CtpD | 2.548 | 1.947 |
| H37Rv_KO_Rv1272 | 0.758 | -1.34 |
| H37Rv_KO_SugABC | -0.949 | -1.554 |
| H37Rv_KO_MbtN | 0.975 | 0.211 |
| Trans05 | -1.381 | -2.518 |
| macrophage_unactivated | 0.514 | -0.338 |
| IL1 | 0.706 | -0.317 |
| Rapamycin | 1.774 | -0.442 |
| Tcell | 1.173 | -0.153 |
| GMCSF | 1.288 | -0.092 |
| IFNab | 2.001 | 0.614 |
| IFNg | 1.804 | 0.238 |
| IFNg_GMCSF1 | 1.769 | -0.575 |
| Rv1432_day32 | 0.201 | 0.823 |
| Rv1565c_day32 | 2.999 | 0.136 |
| secA2_input | 2.453 | 0.321 |
| delta_Rv3594 | -0.451 | -0.402 |
| delta_Rv3717 | -1.144 | -1.057 |
| delta_Rv3811 | -2.014 | -0.886 |
| delta_Rv0954 | -0.908 | -0.43 |
| PonA1 | -0.467 | -2.409 |
| EccD1_KO | -1.848 | -0.125 |
| EspI_KO | -0.493 | -0.953 |
| PE35_KO | -1.301 | -0.42 |
| PPE68_KO | -0.992 | -1.382 |
| glycerol2 | 0.724 | -0.706 |
| lignocerate | -0.023 | -0.258 |
| oleate | -0.109 | -0.442 |
| phosphatidylcholine | 0.14 | -0.419 |
| acetate | 0.166 | -0.888 |
| glucAc | 0.429 | -0.615 |
| Rv0950ko | 1.52 | 2.063 |
| Rv1096ko | 0.449 | 0.464 |
| Rv3684ko | 2.558 | -0.386 |
| delta_otsA_trehalose | 3.444 | -0.632 |