TnSeqCorr

Top 10 genes with highest correlation to Rv0447c/ufaA1:

update plotcorrelationlink to info on gene
Rv2725c/hflX (cc=0.6296) info on Rv2725c/hflX
Rv3655c/- (cc=0.6047) info on Rv3655c/-
Rv3062/ligB (cc=0.6017) info on Rv3062/ligB
Rv2872/vapC43 (cc=0.5796) info on Rv2872/vapC43
Rv1046c/- (cc=0.5766) info on Rv1046c/-
Rv2484c/- (cc=0.557) info on Rv2484c/-
Rv0233/nrdB (cc=0.5421) info on Rv0233/nrdB
Rv0103c/ctpB (cc=0.5414) info on Rv0103c/ctpB
Rv0569/- (cc=0.5325) info on Rv0569/-
Rv2598/- (cc=0.5292) info on Rv2598/-

Correlation of Rv0447c/ufaA1 with Rv0103c/ctpB

Normalized LFCs for Rv0447c/ufaA1:
(description and provenance of datasets)
Rv0447c/ufaA1Rv0103c/ctpB
Fe_supp_jason_reseq

-0.09

0.06

low_pH_jason_reseq

-0.622

-0.805

NO_jason_reseq

0.0

-0.52

B6_jason_reseq

0.083

0.484

MHCII_jason_reseq

0.768

0.859

Isoniazid02

-0.291

-0.071

Rifampicin4

-0.089

0.295

Ethambutol3

0.964

-0.05

Meropenem3

0.211

0.184

Vancomycin16

0.0

0.615

Rv2680_day32

0.409

-0.142

H37Rv_KO_MarP

-0.104

0.581

hypoxia_3wks

-0.179

-0.088

hypoxia_6wks

-0.19

0.219

glycerol

-0.161

-0.638

cholesterol

-0.147

-0.313

AJ

-0.439

-0.126

Bibs02

0.012

-0.115

Bibs02c

-0.182

-0.494

BL6

-0.623

-0.422

BL6a

-0.455

-0.844

BXD01

-0.86

-0.211

BXD010

-0.354

-0.739

BXD011

-0.523

-0.183

BXD03

-1.102

-1.053

BXD04

0.169

-0.581

BXD05

-0.475

-0.667

BXD06

-0.73

-0.512

BXD07

-0.425

-0.633

BXD08

-0.345

0.027

BXD09

0.113

-0.624

CAST

0.038

0.153

CCcont

-0.843

-0.447

DS01

0.181

0.373

DS02

0.323

0.441

DS04

0.26

0.469

DS0c

0.014

0.086

GP01

-0.406

-0.642

GP02

-0.157

-0.143

GP0c

-0.842

-0.855

NOD

1.05

-0.083

NZO

-0.238

-0.315

PWK

0.09

-0.024

H37Rv_KO_CtpC

-0.499

-0.681

H37Rv_KO_CtpD

-0.128

0.382

H37Rv_KO_Rv1272

-0.36

-1.039

H37Rv_KO_SugABC

-0.22

0.0

H37Rv_KO_MbtN

-0.855

-0.228

Trans05

-0.191

-0.349

macrophage_unactivated

-0.114

-0.458

IL1

-0.125

-0.341

Rapamycin

0.331

-0.915

Tcell

-0.684

-0.808

GMCSF

-0.243

-0.055

IFNab

-0.109

-0.169

IFNg

-0.128

0.072

IFNg_GMCSF1

0.236

-0.245

Rv1432_day32

0.94

2.207

Rv1565c_day32

-0.216

-0.153

secA2_input

0.243

1.234

delta_Rv3594

-0.369

-0.292

delta_Rv3717

-0.332

-0.316

delta_Rv3811

-0.079

-0.171

delta_Rv0954

0.025

0.159

PonA1

0.158

-0.03

EccD1_KO

0.533

-0.181

EspI_KO

0.659

-0.65

PE35_KO

-0.298

-0.831

PPE68_KO

0.106

-0.832

glycerol2

-0.092

0.315

lignocerate

-0.08

0.409

oleate

0.319

0.23

phosphatidylcholine

-0.113

0.389

acetate

-0.012

0.64

glucAc

-0.436

0.412

Rv0950ko

0.742

0.829

Rv1096ko

0.992

0.38

Rv3684ko

0.897

0.472

delta_otsA_trehalose

0.461

1.121