Top 10 genes with highest correlation to Rv0446c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3636/- | (cc=0.474) | info on Rv3636/- |
| Rv2857c/- | (cc=0.4455) | info on Rv2857c/- |
| Rv1417/- | (cc=0.4388) | info on Rv1417/- |
| Rv2218/lipA | (cc=0.4315) | info on Rv2218/lipA |
| Rv2234/ptpA | (cc=0.4282) | info on Rv2234/ptpA |
| Rv1496/- | (cc=0.4016) | info on Rv1496/- |
| Rv1269c/- | (cc=0.3973) | info on Rv1269c/- |
| Rv2877c/- | (cc=0.3924) | info on Rv2877c/- |
| Rv3379c/dxs2 | (cc=0.3904) | info on Rv3379c/dxs2 |
| Rv0575c/- | (cc=0.387) | info on Rv0575c/- |
Correlation of Rv0446c/- with Rv2234/ptpA
Normalized LFCs for Rv0446c/-:
(description and provenance of datasets)
| Rv0446c/- | Rv2234/ptpA | |
| Fe_supp_jason_reseq | 1.051 | 1.032 |
| low_pH_jason_reseq | 0.186 | -0.714 |
| NO_jason_reseq | -0.142 | 0.971 |
| B6_jason_reseq | -0.178 | -0.143 |
| MHCII_jason_reseq | 0.678 | 1.228 |
| Isoniazid02 | -0.198 | 0.0 |
| Rifampicin4 | -0.1 | 0.539 |
| Ethambutol3 | 0.202 | 0.207 |
| Meropenem3 | 0.075 | 0.22 |
| Vancomycin16 | 0.072 | 0.17 |
| Rv2680_day32 | -0.628 | -1.672 |
| H37Rv_KO_MarP | 0.392 | 1.23 |
| hypoxia_3wks | 0.339 | 0.299 |
| hypoxia_6wks | -0.169 | 0.418 |
| glycerol | -0.465 | 0.547 |
| cholesterol | -0.203 | -0.645 |
| AJ | -0.183 | 0.145 |
| Bibs02 | -0.673 | -0.536 |
| Bibs02c | 0.023 | -1.905 |
| BL6 | 0.684 | 0.151 |
| BL6a | -0.168 | -0.527 |
| BXD01 | -0.014 | -0.057 |
| BXD010 | -0.139 | -0.358 |
| BXD011 | -0.234 | -0.084 |
| BXD03 | -0.284 | -0.397 |
| BXD04 | 0.585 | 1.19 |
| BXD05 | 0.541 | 0.2 |
| BXD06 | -0.029 | -0.51 |
| BXD07 | 0.171 | 0.927 |
| BXD08 | 0.036 | 0.258 |
| BXD09 | 0.233 | -0.158 |
| CAST | -0.224 | 0.624 |
| CCcont | -0.227 | 0.622 |
| DS01 | -0.344 | -0.265 |
| DS02 | -1.185 | -1.355 |
| DS04 | -0.5 | 0.101 |
| DS0c | -0.385 | -0.432 |
| GP01 | -0.175 | -0.347 |
| GP02 | 0.672 | 0.489 |
| GP0c | -0.119 | -0.31 |
| NOD | -1.103 | -1.152 |
| NZO | 0.022 | -0.92 |
| PWK | 0.053 | -0.575 |
| H37Rv_KO_CtpC | -0.755 | 0.165 |
| H37Rv_KO_CtpD | 0.958 | 0.706 |
| H37Rv_KO_Rv1272 | -0.103 | -0.356 |
| H37Rv_KO_SugABC | 0.613 | 0.91 |
| H37Rv_KO_MbtN | 0.276 | -0.034 |
| Trans05 | 0.021 | 0.661 |
| macrophage_unactivated | 0.224 | 1.247 |
| IL1 | 0.021 | 0.193 |
| Rapamycin | 0.322 | -1.114 |
| Tcell | 0.094 | -0.042 |
| GMCSF | 0.349 | 0.106 |
| IFNab | 0.378 | 0.348 |
| IFNg | 1.09 | 0.802 |
| IFNg_GMCSF1 | 0.135 | -0.085 |
| Rv1432_day32 | -0.498 | -0.098 |
| Rv1565c_day32 | 0.374 | -0.674 |
| secA2_input | -0.518 | 0.756 |
| delta_Rv3594 | -1.002 | -0.252 |
| delta_Rv3717 | -0.638 | -0.367 |
| delta_Rv3811 | -0.836 | -0.036 |
| delta_Rv0954 | 0.631 | -0.6 |
| PonA1 | -0.384 | -0.783 |
| EccD1_KO | -0.191 | -0.286 |
| EspI_KO | 0.248 | -1.158 |
| PE35_KO | -0.073 | -1.076 |
| PPE68_KO | -0.582 | -1.609 |
| glycerol2 | -0.011 | -0.525 |
| lignocerate | 0.253 | -0.541 |
| oleate | -0.101 | -0.291 |
| phosphatidylcholine | -0.066 | -0.126 |
| acetate | -0.482 | -0.738 |
| glucAc | -0.339 | -0.471 |
| Rv0950ko | 0.434 | 0.938 |
| Rv1096ko | 0.694 | 1.532 |
| Rv3684ko | 0.442 | -0.233 |
| delta_otsA_trehalose | -0.645 | 1.289 |