Top 10 genes with highest correlation to Rv0427c/xthA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0581/vapB26 | (cc=0.4738) | info on Rv0581/vapB26 |
| Rv2270/lppN | (cc=0.4667) | info on Rv2270/lppN |
| Rv3768/- | (cc=0.4596) | info on Rv3768/- |
| Rv0161/- | (cc=0.4538) | info on Rv0161/- |
| Rv2673/aftC | (cc=0.4475) | info on Rv2673/aftC |
| Rv0170/mce1B | (cc=0.4363) | info on Rv0170/mce1B |
| Rv1806/PE20 | (cc=0.4345) | info on Rv1806/PE20 |
| Rv0414c/thiE | (cc=0.4275) | info on Rv0414c/thiE |
| Rv2604c/snoP | (cc=0.4263) | info on Rv2604c/snoP |
| Rv3039c/echA17 | (cc=0.4258) | info on Rv3039c/echA17 |
Correlation of Rv0427c/xthA with Rv0161/-
Normalized LFCs for Rv0427c/xthA:
(description and provenance of datasets)
| Rv0427c/xthA | Rv0161/- | |
| Fe_supp_jason_reseq | -0.022 | -0.933 |
| low_pH_jason_reseq | -0.164 | -1.226 |
| NO_jason_reseq | -0.614 | 0.173 |
| B6_jason_reseq | 0.407 | -0.512 |
| MHCII_jason_reseq | -1.19 | -0.645 |
| Isoniazid02 | -0.02 | 0.208 |
| Rifampicin4 | 0.038 | 0.43 |
| Ethambutol3 | 0.218 | -0.118 |
| Meropenem3 | -0.032 | 0.211 |
| Vancomycin16 | 0.411 | 0.682 |
| Rv2680_day32 | 2.278 | 1.308 |
| H37Rv_KO_MarP | 0.792 | -0.023 |
| hypoxia_3wks | 0.845 | 1.228 |
| hypoxia_6wks | 1.437 | 1.865 |
| glycerol | -0.307 | -1.172 |
| cholesterol | -0.435 | 0.027 |
| AJ | -1.351 | -0.728 |
| Bibs02 | -1.209 | -0.348 |
| Bibs02c | 0.841 | 0.194 |
| BL6 | 0.618 | 0.639 |
| BL6a | 0.882 | 1.012 |
| BXD01 | 0.484 | 0.769 |
| BXD010 | 0.495 | 0.798 |
| BXD011 | 0.241 | 0.588 |
| BXD03 | -0.172 | 0.674 |
| BXD04 | 1.337 | 1.686 |
| BXD05 | 0.112 | 0.671 |
| BXD06 | -0.029 | 0.458 |
| BXD07 | 0.597 | 0.802 |
| BXD08 | 0.474 | 1.42 |
| BXD09 | 0.031 | 0.89 |
| CAST | 0.098 | -1.044 |
| CCcont | 0.567 | 0.763 |
| DS01 | -1.16 | -0.092 |
| DS02 | -0.922 | -0.315 |
| DS04 | -0.791 | -0.415 |
| DS0c | -0.121 | -0.363 |
| GP01 | -0.853 | -0.143 |
| GP02 | -0.028 | -0.121 |
| GP0c | 0.523 | 0.517 |
| NOD | -0.151 | 0.168 |
| NZO | -0.6 | 0.685 |
| PWK | 0.104 | 0.182 |
| H37Rv_KO_CtpC | 0.501 | 0.848 |
| H37Rv_KO_CtpD | -0.292 | 0.816 |
| H37Rv_KO_Rv1272 | -0.18 | 1.425 |
| H37Rv_KO_SugABC | -0.655 | -1.398 |
| H37Rv_KO_MbtN | 0.429 | -0.407 |
| Trans05 | 0.014 | 1.704 |
| macrophage_unactivated | -0.533 | -0.65 |
| IL1 | -0.314 | -0.854 |
| Rapamycin | 0.399 | -0.396 |
| Tcell | -0.267 | -0.182 |
| GMCSF | -0.029 | -0.673 |
| IFNab | -0.212 | -0.212 |
| IFNg | -0.452 | -0.037 |
| IFNg_GMCSF1 | 0.474 | -0.647 |
| Rv1432_day32 | 0.404 | -0.164 |
| Rv1565c_day32 | 0.619 | -0.938 |
| secA2_input | -0.249 | -1.047 |
| delta_Rv3594 | 0.089 | -0.307 |
| delta_Rv3717 | 0.386 | -0.112 |
| delta_Rv3811 | 0.645 | 0.427 |
| delta_Rv0954 | -1.162 | 0.143 |
| PonA1 | 0.017 | -0.547 |
| EccD1_KO | 1.704 | 0.243 |
| EspI_KO | 1.477 | 0.565 |
| PE35_KO | 1.327 | -0.181 |
| PPE68_KO | 1.369 | 0.048 |
| glycerol2 | -1.023 | 0.247 |
| lignocerate | -0.911 | -0.867 |
| oleate | -0.885 | 0.472 |
| phosphatidylcholine | -1.099 | -0.282 |
| acetate | -0.745 | -0.161 |
| glucAc | -0.593 | -0.143 |
| Rv0950ko | 0.09 | 0.0 |
| Rv1096ko | 0.63 | 0.917 |
| Rv3684ko | 1.094 | 0.802 |
| delta_otsA_trehalose | 0.27 | -0.413 |