Top 10 genes with highest correlation to Rv0413/mutT3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0231/fadE4 | (cc=0.6135) | info on Rv0231/fadE4 |
| Rv3329/- | (cc=0.5844) | info on Rv3329/- |
| Rv0991c/- | (cc=0.5842) | info on Rv0991c/- |
| Rv0975c/fadE13 | (cc=0.5633) | info on Rv0975c/fadE13 |
| Rv0932c/pstS2 | (cc=0.5549) | info on Rv0932c/pstS2 |
| Rv0342/iniA | (cc=0.5504) | info on Rv0342/iniA |
| Rv0940c/- | (cc=0.5288) | info on Rv0940c/- |
| Rv3191c/- | (cc=0.5236) | info on Rv3191c/- |
| Rv0399c/lpqK | (cc=0.517) | info on Rv0399c/lpqK |
| Rv3397c/phyA | (cc=0.515) | info on Rv3397c/phyA |
Correlation of Rv0413/mutT3 with Rv3329/-
Normalized LFCs for Rv0413/mutT3:
(description and provenance of datasets)
| Rv0413/mutT3 | Rv3329/- | |
| Fe_supp_jason_reseq | -0.687 | 0.0 |
| low_pH_jason_reseq | 0.184 | 0.33 |
| NO_jason_reseq | 1.16 | 0.257 |
| B6_jason_reseq | 2.963 | 0.714 |
| MHCII_jason_reseq | -0.088 | 0.049 |
| Isoniazid02 | -4.688 | -2.423 |
| Rifampicin4 | -1.841 | 0.598 |
| Ethambutol3 | -2.768 | -1.639 |
| Meropenem3 | -2.323 | -2.211 |
| Vancomycin16 | -1.563 | -0.947 |
| Rv2680_day32 | -0.505 | -0.046 |
| H37Rv_KO_MarP | -0.124 | -0.354 |
| hypoxia_3wks | -0.136 | 0.323 |
| hypoxia_6wks | 0.374 | 0.418 |
| glycerol | 0.282 | 0.294 |
| cholesterol | 0.467 | 0.128 |
| AJ | 0.546 | 0.576 |
| Bibs02 | 0.536 | 0.114 |
| Bibs02c | -0.133 | -0.471 |
| BL6 | 1.424 | -0.095 |
| BL6a | 0.425 | -0.357 |
| BXD01 | 1.626 | 0.024 |
| BXD010 | 0.521 | -0.183 |
| BXD011 | 0.519 | -0.136 |
| BXD03 | 0.464 | 0.412 |
| BXD04 | 1.339 | -0.07 |
| BXD05 | 0.23 | 0.47 |
| BXD06 | 0.549 | -0.013 |
| BXD07 | 1.134 | 0.197 |
| BXD08 | 2.132 | 0.321 |
| BXD09 | 0.909 | -0.079 |
| CAST | 3.293 | 0.28 |
| CCcont | 0.272 | -0.159 |
| DS01 | -0.277 | 0.137 |
| DS02 | -0.072 | 0.444 |
| DS04 | 0.777 | 0.035 |
| DS0c | -0.064 | 0.079 |
| GP01 | 1.109 | 0.022 |
| GP02 | -0.691 | -0.011 |
| GP0c | -0.017 | -0.716 |
| NOD | 0.835 | -0.063 |
| NZO | 0.803 | 0.656 |
| PWK | 1.805 | 0.459 |
| H37Rv_KO_CtpC | 1.129 | -0.471 |
| H37Rv_KO_CtpD | -0.667 | -0.278 |
| H37Rv_KO_Rv1272 | -0.605 | -0.856 |
| H37Rv_KO_SugABC | 0.194 | -0.375 |
| H37Rv_KO_MbtN | -0.309 | -0.939 |
| Trans05 | 0.133 | -0.265 |
| macrophage_unactivated | -1.162 | -0.281 |
| IL1 | -0.009 | 0.098 |
| Rapamycin | 0.457 | 0.199 |
| Tcell | -0.358 | -0.042 |
| GMCSF | -0.29 | 0.069 |
| IFNab | -0.529 | -0.375 |
| IFNg | 0.615 | 0.088 |
| IFNg_GMCSF1 | 0.757 | 0.041 |
| Rv1432_day32 | 3.568 | -0.288 |
| Rv1565c_day32 | 0.025 | 0.627 |
| secA2_input | 0.429 | 0.343 |
| delta_Rv3594 | -0.274 | -0.314 |
| delta_Rv3717 | 0.165 | -0.258 |
| delta_Rv3811 | -0.51 | -0.421 |
| delta_Rv0954 | -0.452 | 0.094 |
| PonA1 | 0.232 | 0.264 |
| EccD1_KO | 1.033 | -0.428 |
| EspI_KO | -0.063 | 0.1 |
| PE35_KO | -0.694 | -0.7 |
| PPE68_KO | -0.541 | -0.115 |
| glycerol2 | 0.324 | 0.113 |
| lignocerate | 0.362 | 0.244 |
| oleate | -0.346 | 0.658 |
| phosphatidylcholine | 0.931 | 0.314 |
| acetate | -0.279 | -0.07 |
| glucAc | -0.143 | -0.458 |
| Rv0950ko | 1.33 | 0.054 |
| Rv1096ko | 1.607 | 0.262 |
| Rv3684ko | 2.492 | -0.118 |
| delta_otsA_trehalose | 0.252 | 0.232 |