Top 10 genes with highest correlation to Rv0413/mutT3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0231/fadE4 | (cc=0.6135) | info on Rv0231/fadE4 |
| Rv3329/- | (cc=0.5844) | info on Rv3329/- |
| Rv0991c/- | (cc=0.5842) | info on Rv0991c/- |
| Rv0975c/fadE13 | (cc=0.5633) | info on Rv0975c/fadE13 |
| Rv0932c/pstS2 | (cc=0.5549) | info on Rv0932c/pstS2 |
| Rv0342/iniA | (cc=0.5504) | info on Rv0342/iniA |
| Rv0940c/- | (cc=0.5288) | info on Rv0940c/- |
| Rv3191c/- | (cc=0.5236) | info on Rv3191c/- |
| Rv0399c/lpqK | (cc=0.517) | info on Rv0399c/lpqK |
| Rv3397c/phyA | (cc=0.515) | info on Rv3397c/phyA |
Correlation of Rv0413/mutT3 with Rv0940c/-
Normalized LFCs for Rv0413/mutT3:
(description and provenance of datasets)
| Rv0413/mutT3 | Rv0940c/- | |
| Fe_supp_jason_reseq | -0.687 | -0.546 |
| low_pH_jason_reseq | 0.184 | -0.445 |
| NO_jason_reseq | 1.16 | 0.126 |
| B6_jason_reseq | 2.963 | -0.989 |
| MHCII_jason_reseq | -0.088 | -0.421 |
| Isoniazid02 | -4.688 | -4.434 |
| Rifampicin4 | -1.841 | 0.482 |
| Ethambutol3 | -2.768 | -3.779 |
| Meropenem3 | -2.323 | -4.315 |
| Vancomycin16 | -1.563 | -1.417 |
| Rv2680_day32 | -0.505 | 0.113 |
| H37Rv_KO_MarP | -0.124 | -0.255 |
| hypoxia_3wks | -0.136 | -0.841 |
| hypoxia_6wks | 0.374 | 0.754 |
| glycerol | 0.282 | 0.316 |
| cholesterol | 0.467 | 0.168 |
| AJ | 0.546 | 0.57 |
| Bibs02 | 0.536 | -1.015 |
| Bibs02c | -0.133 | -0.311 |
| BL6 | 1.424 | 0.847 |
| BL6a | 0.425 | 0.284 |
| BXD01 | 1.626 | 0.715 |
| BXD010 | 0.521 | 1.34 |
| BXD011 | 0.519 | 0.711 |
| BXD03 | 0.464 | 0.332 |
| BXD04 | 1.339 | 1.328 |
| BXD05 | 0.23 | 0.263 |
| BXD06 | 0.549 | 1.327 |
| BXD07 | 1.134 | 1.065 |
| BXD08 | 2.132 | 0.743 |
| BXD09 | 0.909 | 0.917 |
| CAST | 3.293 | 0.754 |
| CCcont | 0.272 | 1.0 |
| DS01 | -0.277 | 0.719 |
| DS02 | -0.072 | 0.736 |
| DS04 | 0.777 | 1.234 |
| DS0c | -0.064 | -0.102 |
| GP01 | 1.109 | 0.312 |
| GP02 | -0.691 | -0.803 |
| GP0c | -0.017 | -0.446 |
| NOD | 0.835 | 0.469 |
| NZO | 0.803 | 1.52 |
| PWK | 1.805 | 0.254 |
| H37Rv_KO_CtpC | 1.129 | 0.585 |
| H37Rv_KO_CtpD | -0.667 | 0.147 |
| H37Rv_KO_Rv1272 | -0.605 | 1.095 |
| H37Rv_KO_SugABC | 0.194 | 0.088 |
| H37Rv_KO_MbtN | -0.309 | 0.528 |
| Trans05 | 0.133 | 0.895 |
| macrophage_unactivated | -1.162 | -0.082 |
| IL1 | -0.009 | -0.317 |
| Rapamycin | 0.457 | -0.16 |
| Tcell | -0.358 | 0.205 |
| GMCSF | -0.29 | -0.137 |
| IFNab | -0.529 | -1.868 |
| IFNg | 0.615 | -1.446 |
| IFNg_GMCSF1 | 0.757 | -1.197 |
| Rv1432_day32 | 3.568 | 1.249 |
| Rv1565c_day32 | 0.025 | 0.692 |
| secA2_input | 0.429 | -0.863 |
| delta_Rv3594 | -0.274 | -0.571 |
| delta_Rv3717 | 0.165 | -0.691 |
| delta_Rv3811 | -0.51 | -0.663 |
| delta_Rv0954 | -0.452 | -1.222 |
| PonA1 | 0.232 | -1.092 |
| EccD1_KO | 1.033 | 0.089 |
| EspI_KO | -0.063 | 1.087 |
| PE35_KO | -0.694 | 0.522 |
| PPE68_KO | -0.541 | 0.65 |
| glycerol2 | 0.324 | 1.375 |
| lignocerate | 0.362 | 2.046 |
| oleate | -0.346 | -0.469 |
| phosphatidylcholine | 0.931 | 1.426 |
| acetate | -0.279 | 1.812 |
| glucAc | -0.143 | 1.613 |
| Rv0950ko | 1.33 | -0.482 |
| Rv1096ko | 1.607 | -0.115 |
| Rv3684ko | 2.492 | -0.524 |
| delta_otsA_trehalose | 0.252 | 0.254 |