Top 10 genes with highest correlation to Rv0404/fadD30:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1513/- | (cc=0.607) | info on Rv1513/- |
| Rv0059/- | (cc=0.5558) | info on Rv0059/- |
| Rv2267c/- | (cc=0.5504) | info on Rv2267c/- |
| Rv3109/moaA1 | (cc=0.4811) | info on Rv3109/moaA1 |
| Rv2195/qcrA | (cc=0.4701) | info on Rv2195/qcrA |
| Rv2336/- | (cc=0.4632) | info on Rv2336/- |
| Rv3168/- | (cc=0.4614) | info on Rv3168/- |
| Rv0045c/- | (cc=0.4586) | info on Rv0045c/- |
| Rv3383c/idsB | (cc=0.4583) | info on Rv3383c/idsB |
| Rv2791c/- | (cc=0.4551) | info on Rv2791c/- |
Correlation of Rv0404/fadD30 with Rv1513/-
Normalized LFCs for Rv0404/fadD30:
(description and provenance of datasets)
| Rv0404/fadD30 | Rv1513/- | |
| Fe_supp_jason_reseq | 0.556 | 1.725 |
| low_pH_jason_reseq | 0.549 | -0.539 |
| NO_jason_reseq | 0.158 | 1.62 |
| B6_jason_reseq | 0.162 | 0.052 |
| MHCII_jason_reseq | 0.581 | -0.72 |
| Isoniazid02 | -0.358 | -0.39 |
| Rifampicin4 | -0.236 | -0.726 |
| Ethambutol3 | -0.563 | -0.326 |
| Meropenem3 | -0.141 | -0.531 |
| Vancomycin16 | -0.077 | -0.072 |
| Rv2680_day32 | 0.21 | 0.881 |
| H37Rv_KO_MarP | 0.282 | 1.051 |
| hypoxia_3wks | 0.443 | 1.061 |
| hypoxia_6wks | 0.447 | -0.731 |
| glycerol | -0.531 | -0.992 |
| cholesterol | 0.129 | -0.568 |
| AJ | 0.207 | 0.417 |
| Bibs02 | 1.027 | 0.694 |
| Bibs02c | -0.152 | -1.808 |
| BL6 | 0.138 | -1.52 |
| BL6a | 0.133 | 1.083 |
| BXD01 | 0.03 | 0.9 |
| BXD010 | 0.114 | 0.041 |
| BXD011 | 0.53 | 1.169 |
| BXD03 | 0.383 | 0.74 |
| BXD04 | 0.553 | 0.993 |
| BXD05 | 0.68 | 1.324 |
| BXD06 | 0.33 | 0.9 |
| BXD07 | -0.1 | 1.112 |
| BXD08 | -0.235 | 1.006 |
| BXD09 | 0.398 | 0.822 |
| CAST | 0.205 | 1.26 |
| CCcont | -0.348 | -0.988 |
| DS01 | 0.108 | -0.419 |
| DS02 | 0.372 | 0.449 |
| DS04 | -0.093 | -1.677 |
| DS0c | -0.05 | -0.652 |
| GP01 | 0.067 | -0.138 |
| GP02 | -0.622 | 1.734 |
| GP0c | -0.23 | -0.86 |
| NOD | 0.151 | -1.351 |
| NZO | 0.701 | 0.845 |
| PWK | 0.132 | -1.695 |
| H37Rv_KO_CtpC | -0.158 | -1.53 |
| H37Rv_KO_CtpD | 1.03 | 1.586 |
| H37Rv_KO_Rv1272 | 0.848 | 0.877 |
| H37Rv_KO_SugABC | 0.784 | -0.933 |
| H37Rv_KO_MbtN | 0.156 | -0.183 |
| Trans05 | 0.661 | 1.088 |
| macrophage_unactivated | -0.186 | -1.474 |
| IL1 | -0.848 | -1.622 |
| Rapamycin | -0.878 | -1.197 |
| Tcell | 0.186 | -0.189 |
| GMCSF | -0.401 | -0.367 |
| IFNab | -0.363 | 0.333 |
| IFNg | -0.078 | -2.106 |
| IFNg_GMCSF1 | -0.28 | -1.549 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.142 | -1.82 |
| secA2_input | -0.283 | -1.398 |
| delta_Rv3594 | -0.549 | -1.741 |
| delta_Rv3717 | -0.452 | -1.601 |
| delta_Rv3811 | -1.12 | -2.787 |
| delta_Rv0954 | -0.589 | -0.7 |
| PonA1 | -0.733 | -3.817 |
| EccD1_KO | 0.086 | -1.171 |
| EspI_KO | -0.234 | -0.776 |
| PE35_KO | 0.076 | 0.0 |
| PPE68_KO | 0.41 | -0.374 |
| glycerol2 | -0.144 | -0.388 |
| lignocerate | -0.446 | -1.431 |
| oleate | 0.264 | 0.352 |
| phosphatidylcholine | 0.102 | -0.506 |
| acetate | -0.454 | -1.553 |
| glucAc | -0.841 | -4.028 |
| Rv0950ko | 0.467 | 1.885 |
| Rv1096ko | -0.253 | 0.682 |
| Rv3684ko | -0.468 | 2.047 |
| delta_otsA_trehalose | 1.189 | 5.088 |