Top 10 genes with highest correlation to Rv0386/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0229c/- | (cc=0.5902) | info on Rv0229c/- |
| Rv1046c/- | (cc=0.5679) | info on Rv1046c/- |
| Rv0359/- | (cc=0.5372) | info on Rv0359/- |
| Rv3062/ligB | (cc=0.534) | info on Rv3062/ligB |
| Rv1032c/trcS | (cc=0.5292) | info on Rv1032c/trcS |
| Rv1632c/- | (cc=0.5239) | info on Rv1632c/- |
| Rv3136A/- | (cc=0.5235) | info on Rv3136A/- |
| Rv0470A/- | (cc=0.5232) | info on Rv0470A/- |
| Rv3655c/- | (cc=0.5219) | info on Rv3655c/- |
| Rv0965c/- | (cc=0.5211) | info on Rv0965c/- |
Correlation of Rv0386/- with Rv0965c/-
Normalized LFCs for Rv0386/-:
(description and provenance of datasets)
| Rv0386/- | Rv0965c/- | |
| Fe_supp_jason_reseq | -0.396 | 0.488 |
| low_pH_jason_reseq | 0.064 | 0.681 |
| NO_jason_reseq | 0.234 | -0.042 |
| B6_jason_reseq | 1.913 | 2.125 |
| MHCII_jason_reseq | 0.462 | 1.421 |
| Isoniazid02 | 1.461 | 0.233 |
| Rifampicin4 | -0.106 | 0.55 |
| Ethambutol3 | 1.66 | -0.01 |
| Meropenem3 | 0.108 | -0.501 |
| Vancomycin16 | 0.202 | 0.406 |
| Rv2680_day32 | -0.185 | -0.883 |
| H37Rv_KO_MarP | 0.598 | 0.357 |
| hypoxia_3wks | 0.132 | 0.0 |
| hypoxia_6wks | 0.138 | -0.685 |
| glycerol | 0.01 | -1.985 |
| cholesterol | -0.205 | 0.3 |
| AJ | -0.101 | -0.18 |
| Bibs02 | 0.532 | -1.134 |
| Bibs02c | 0.226 | 0.112 |
| BL6 | 0.13 | -0.776 |
| BL6a | 0.056 | -1.357 |
| BXD01 | -0.611 | -1.515 |
| BXD010 | -0.231 | -0.572 |
| BXD011 | -0.35 | -1.406 |
| BXD03 | -0.092 | -2.898 |
| BXD04 | -0.627 | -1.991 |
| BXD05 | -0.377 | -1.859 |
| BXD06 | -0.451 | -0.902 |
| BXD07 | -0.449 | -1.529 |
| BXD08 | -0.485 | -3.201 |
| BXD09 | -0.343 | -1.792 |
| CAST | 0.776 | 0.133 |
| CCcont | -0.564 | -2.035 |
| DS01 | -0.272 | 0.257 |
| DS02 | 0.08 | 0.711 |
| DS04 | 0.167 | 1.176 |
| DS0c | -0.159 | -0.262 |
| GP01 | 0.302 | -1.383 |
| GP02 | 0.233 | -0.737 |
| GP0c | -0.325 | -1.213 |
| NOD | 0.47 | -0.683 |
| NZO | 0.41 | -1.183 |
| PWK | 0.236 | -0.583 |
| H37Rv_KO_CtpC | 0.491 | 0.169 |
| H37Rv_KO_CtpD | 0.12 | -0.394 |
| H37Rv_KO_Rv1272 | -0.611 | -0.789 |
| H37Rv_KO_SugABC | -0.024 | -0.072 |
| H37Rv_KO_MbtN | -0.606 | -0.912 |
| Trans05 | -0.063 | -0.515 |
| macrophage_unactivated | 0.42 | -0.773 |
| IL1 | -0.021 | -1.507 |
| Rapamycin | -0.129 | -1.366 |
| Tcell | 0.046 | 0.681 |
| GMCSF | 0.037 | 0.803 |
| IFNab | -0.215 | -1.735 |
| IFNg | 0.27 | 0.118 |
| IFNg_GMCSF1 | 0.088 | -0.446 |
| Rv1432_day32 | 0.441 | -0.299 |
| Rv1565c_day32 | -0.114 | -0.599 |
| secA2_input | 0.0 | 0.114 |
| delta_Rv3594 | -0.28 | -0.093 |
| delta_Rv3717 | 0.081 | 0.559 |
| delta_Rv3811 | -0.372 | 0.833 |
| delta_Rv0954 | -0.349 | -0.119 |
| PonA1 | 0.349 | 0.132 |
| EccD1_KO | 0.73 | -0.526 |
| EspI_KO | 0.251 | -0.622 |
| PE35_KO | 0.0 | -0.948 |
| PPE68_KO | -0.109 | 0.0 |
| glycerol2 | 0.136 | 0.014 |
| lignocerate | 0.229 | -0.133 |
| oleate | 0.422 | 0.696 |
| phosphatidylcholine | 0.148 | 0.0 |
| acetate | 0.05 | -0.773 |
| glucAc | -0.021 | -1.034 |
| Rv0950ko | 0.703 | 0.733 |
| Rv1096ko | 0.938 | 1.33 |
| Rv3684ko | 1.019 | 1.618 |
| delta_otsA_trehalose | 0.059 | -0.147 |