Top 10 genes with highest correlation to Rv0383c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3439c/- | (cc=0.5428) | info on Rv3439c/- |
| Rv0841/- | (cc=0.4974) | info on Rv0841/- |
| Rv0433/- | (cc=0.4889) | info on Rv0433/- |
| Rv1859/modC | (cc=0.4883) | info on Rv1859/modC |
| Rv3703c/- | (cc=0.482) | info on Rv3703c/- |
| Rv1184c/- | (cc=0.4801) | info on Rv1184c/- |
| Rv0010c/- | (cc=0.4724) | info on Rv0010c/- |
| Rv2727c/miaA | (cc=0.4688) | info on Rv2727c/miaA |
| Rv0237/lpqI | (cc=0.4641) | info on Rv0237/lpqI |
| Rv0616A/vapB29 | (cc=0.4633) | info on Rv0616A/vapB29 |
Correlation of Rv0383c/- with Rv0616A/vapB29
Normalized LFCs for Rv0383c/-:
(description and provenance of datasets)
| Rv0383c/- | Rv0616A/vapB29 | |
| Fe_supp_jason_reseq | 0.0 | 0.635 |
| low_pH_jason_reseq | 0.738 | -1.066 |
| NO_jason_reseq | -0.746 | -1.089 |
| B6_jason_reseq | 0.214 | 0.057 |
| MHCII_jason_reseq | 1.051 | 1.027 |
| Isoniazid02 | 0.496 | -0.53 |
| Rifampicin4 | 1.497 | -2.708 |
| Ethambutol3 | 0.59 | -1.721 |
| Meropenem3 | 0.497 | -1.538 |
| Vancomycin16 | 0.48 | -1.287 |
| Rv2680_day32 | 0.576 | 0.473 |
| H37Rv_KO_MarP | 1.109 | 0.299 |
| hypoxia_3wks | -0.989 | -2.165 |
| hypoxia_6wks | 0.23 | -1.036 |
| glycerol | 1.33 | -0.796 |
| cholesterol | 1.587 | -0.783 |
| AJ | 0.713 | -1.309 |
| Bibs02 | -0.415 | -0.564 |
| Bibs02c | 1.32 | -0.059 |
| BL6 | -0.595 | 0.71 |
| BL6a | -0.449 | -1.231 |
| BXD01 | -0.911 | -3.352 |
| BXD010 | 0.211 | -2.113 |
| BXD011 | -0.829 | -1.331 |
| BXD03 | -0.223 | -1.267 |
| BXD04 | -0.692 | -2.682 |
| BXD05 | 0.192 | -0.441 |
| BXD06 | -1.002 | -2.329 |
| BXD07 | -0.716 | -2.639 |
| BXD08 | -1.398 | -1.06 |
| BXD09 | 0.07 | -2.72 |
| CAST | 0.329 | 1.89 |
| CCcont | -0.203 | -1.299 |
| DS01 | -0.613 | -0.881 |
| DS02 | 0.31 | 0.375 |
| DS04 | -1.56 | -2.35 |
| DS0c | -0.173 | -1.958 |
| GP01 | -0.642 | -2.932 |
| GP02 | -0.999 | -0.706 |
| GP0c | 0.156 | -1.83 |
| NOD | -0.734 | 0.182 |
| NZO | 0.613 | -0.666 |
| PWK | -0.509 | -0.372 |
| H37Rv_KO_CtpC | -0.981 | -1.466 |
| H37Rv_KO_CtpD | 0.436 | -3.192 |
| H37Rv_KO_Rv1272 | -1.693 | -3.483 |
| H37Rv_KO_SugABC | -1.362 | -0.939 |
| H37Rv_KO_MbtN | -1.083 | -1.432 |
| Trans05 | -1.927 | -0.916 |
| macrophage_unactivated | -0.354 | -2.007 |
| IL1 | 0.308 | -1.323 |
| Rapamycin | 0.62 | -1.765 |
| Tcell | -0.121 | -1.32 |
| GMCSF | 1.143 | 0.306 |
| IFNab | 1.466 | -0.837 |
| IFNg | 0.0 | 0.134 |
| IFNg_GMCSF1 | 1.276 | -1.313 |
| Rv1432_day32 | 0.0 | -0.475 |
| Rv1565c_day32 | 0.0 | 0.265 |
| secA2_input | 0.492 | -1.853 |
| delta_Rv3594 | 1.199 | 0.702 |
| delta_Rv3717 | 0.927 | 0.405 |
| delta_Rv3811 | 2.396 | 1.939 |
| delta_Rv0954 | 1.708 | 1.799 |
| PonA1 | 2.331 | 2.649 |
| EccD1_KO | -1.115 | 0.194 |
| EspI_KO | -1.412 | -2.073 |
| PE35_KO | -1.741 | -2.121 |
| PPE68_KO | -1.584 | -1.078 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.235 | 1.61 |
| oleate | 0.829 | 0.196 |
| phosphatidylcholine | 0.14 | 0.531 |
| acetate | 2.056 | 2.382 |
| glucAc | 0.74 | 2.569 |
| Rv0950ko | 1.028 | -2.053 |
| Rv1096ko | 0.19 | -0.648 |
| Rv3684ko | 0.861 | -1.87 |
| delta_otsA_trehalose | -0.147 | 2.222 |