Top 10 genes with highest correlation to Rv0383c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3439c/- | (cc=0.5428) | info on Rv3439c/- |
| Rv0841/- | (cc=0.4974) | info on Rv0841/- |
| Rv0433/- | (cc=0.4889) | info on Rv0433/- |
| Rv1859/modC | (cc=0.4883) | info on Rv1859/modC |
| Rv3703c/- | (cc=0.482) | info on Rv3703c/- |
| Rv1184c/- | (cc=0.4801) | info on Rv1184c/- |
| Rv0010c/- | (cc=0.4724) | info on Rv0010c/- |
| Rv2727c/miaA | (cc=0.4688) | info on Rv2727c/miaA |
| Rv0237/lpqI | (cc=0.4641) | info on Rv0237/lpqI |
| Rv0616A/vapB29 | (cc=0.4633) | info on Rv0616A/vapB29 |
Correlation of Rv0383c/- with Rv0237/lpqI
Normalized LFCs for Rv0383c/-:
(description and provenance of datasets)
| Rv0383c/- | Rv0237/lpqI | |
| Fe_supp_jason_reseq | 0.0 | 0.87 |
| low_pH_jason_reseq | 0.738 | 1.166 |
| NO_jason_reseq | -0.746 | -3.187 |
| B6_jason_reseq | 0.214 | -0.303 |
| MHCII_jason_reseq | 1.051 | 1.499 |
| Isoniazid02 | 0.496 | -0.34 |
| Rifampicin4 | 1.497 | 1.026 |
| Ethambutol3 | 0.59 | 0.461 |
| Meropenem3 | 0.497 | 0.138 |
| Vancomycin16 | 0.48 | -0.775 |
| Rv2680_day32 | 0.576 | 1.358 |
| H37Rv_KO_MarP | 1.109 | -0.265 |
| hypoxia_3wks | -0.989 | 0.295 |
| hypoxia_6wks | 0.23 | 0.155 |
| glycerol | 1.33 | -0.923 |
| cholesterol | 1.587 | -0.019 |
| AJ | 0.713 | 0.15 |
| Bibs02 | -0.415 | 0.162 |
| Bibs02c | 1.32 | 0.703 |
| BL6 | -0.595 | -0.796 |
| BL6a | -0.449 | 0.27 |
| BXD01 | -0.911 | -0.287 |
| BXD010 | 0.211 | -1.54 |
| BXD011 | -0.829 | -0.388 |
| BXD03 | -0.223 | -1.806 |
| BXD04 | -0.692 | -0.816 |
| BXD05 | 0.192 | -1.41 |
| BXD06 | -1.002 | -1.135 |
| BXD07 | -0.716 | -0.985 |
| BXD08 | -1.398 | -0.782 |
| BXD09 | 0.07 | -1.075 |
| CAST | 0.329 | -0.432 |
| CCcont | -0.203 | -0.123 |
| DS01 | -0.613 | -0.195 |
| DS02 | 0.31 | 0.37 |
| DS04 | -1.56 | -2.032 |
| DS0c | -0.173 | 1.265 |
| GP01 | -0.642 | -1.147 |
| GP02 | -0.999 | -1.569 |
| GP0c | 0.156 | -0.995 |
| NOD | -0.734 | 1.642 |
| NZO | 0.613 | -1.884 |
| PWK | -0.509 | 0.026 |
| H37Rv_KO_CtpC | -0.981 | -0.385 |
| H37Rv_KO_CtpD | 0.436 | -0.934 |
| H37Rv_KO_Rv1272 | -1.693 | -0.797 |
| H37Rv_KO_SugABC | -1.362 | 0.191 |
| H37Rv_KO_MbtN | -1.083 | -1.283 |
| Trans05 | -1.927 | -0.681 |
| macrophage_unactivated | -0.354 | 0.271 |
| IL1 | 0.308 | -0.869 |
| Rapamycin | 0.62 | 0.089 |
| Tcell | -0.121 | -0.196 |
| GMCSF | 1.143 | 0.576 |
| IFNab | 1.466 | 0.088 |
| IFNg | 0.0 | -0.16 |
| IFNg_GMCSF1 | 1.276 | 0.27 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.867 |
| secA2_input | 0.492 | 1.702 |
| delta_Rv3594 | 1.199 | -0.477 |
| delta_Rv3717 | 0.927 | -0.311 |
| delta_Rv3811 | 2.396 | -0.165 |
| delta_Rv0954 | 1.708 | 1.053 |
| PonA1 | 2.331 | 0.665 |
| EccD1_KO | -1.115 | -1.829 |
| EspI_KO | -1.412 | -1.985 |
| PE35_KO | -1.741 | -1.916 |
| PPE68_KO | -1.584 | -2.582 |
| glycerol2 | 0.0 | -0.219 |
| lignocerate | 0.235 | -0.712 |
| oleate | 0.829 | -0.583 |
| phosphatidylcholine | 0.14 | -0.359 |
| acetate | 2.056 | 0.271 |
| glucAc | 0.74 | -0.026 |
| Rv0950ko | 1.028 | 0.175 |
| Rv1096ko | 0.19 | -0.323 |
| Rv3684ko | 0.861 | -0.508 |
| delta_otsA_trehalose | -0.147 | 0.388 |