Top 10 genes with highest correlation to Rv0383c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3439c/- | (cc=0.5428) | info on Rv3439c/- |
| Rv0841/- | (cc=0.4974) | info on Rv0841/- |
| Rv0433/- | (cc=0.4889) | info on Rv0433/- |
| Rv1859/modC | (cc=0.4883) | info on Rv1859/modC |
| Rv3703c/- | (cc=0.482) | info on Rv3703c/- |
| Rv1184c/- | (cc=0.4801) | info on Rv1184c/- |
| Rv0010c/- | (cc=0.4724) | info on Rv0010c/- |
| Rv2727c/miaA | (cc=0.4688) | info on Rv2727c/miaA |
| Rv0237/lpqI | (cc=0.4641) | info on Rv0237/lpqI |
| Rv0616A/vapB29 | (cc=0.4633) | info on Rv0616A/vapB29 |
Correlation of Rv0383c/- with Rv3439c/-
Normalized LFCs for Rv0383c/-:
(description and provenance of datasets)
| Rv0383c/- | Rv3439c/- | |
| Fe_supp_jason_reseq | 0.0 | -0.661 |
| low_pH_jason_reseq | 0.738 | -1.138 |
| NO_jason_reseq | -0.746 | -0.41 |
| B6_jason_reseq | 0.214 | 0.863 |
| MHCII_jason_reseq | 1.051 | 0.712 |
| Isoniazid02 | 0.496 | 0.49 |
| Rifampicin4 | 1.497 | 0.501 |
| Ethambutol3 | 0.59 | 0.216 |
| Meropenem3 | 0.497 | 0.944 |
| Vancomycin16 | 0.48 | 0.329 |
| Rv2680_day32 | 0.576 | -0.131 |
| H37Rv_KO_MarP | 1.109 | 0.008 |
| hypoxia_3wks | -0.989 | 0.064 |
| hypoxia_6wks | 0.23 | 0.416 |
| glycerol | 1.33 | 0.831 |
| cholesterol | 1.587 | -0.004 |
| AJ | 0.713 | 0.35 |
| Bibs02 | -0.415 | -0.852 |
| Bibs02c | 1.32 | 0.596 |
| BL6 | -0.595 | -0.167 |
| BL6a | -0.449 | -0.258 |
| BXD01 | -0.911 | -0.84 |
| BXD010 | 0.211 | -0.482 |
| BXD011 | -0.829 | -0.788 |
| BXD03 | -0.223 | -0.476 |
| BXD04 | -0.692 | -1.466 |
| BXD05 | 0.192 | -0.633 |
| BXD06 | -1.002 | -0.519 |
| BXD07 | -0.716 | -0.991 |
| BXD08 | -1.398 | -0.382 |
| BXD09 | 0.07 | -0.506 |
| CAST | 0.329 | -0.22 |
| CCcont | -0.203 | -0.209 |
| DS01 | -0.613 | 0.573 |
| DS02 | 0.31 | 0.443 |
| DS04 | -1.56 | -0.131 |
| DS0c | -0.173 | 0.234 |
| GP01 | -0.642 | 0.022 |
| GP02 | -0.999 | -0.036 |
| GP0c | 0.156 | -0.339 |
| NOD | -0.734 | -0.739 |
| NZO | 0.613 | 0.533 |
| PWK | -0.509 | 0.507 |
| H37Rv_KO_CtpC | -0.981 | -1.21 |
| H37Rv_KO_CtpD | 0.436 | 0.156 |
| H37Rv_KO_Rv1272 | -1.693 | -0.388 |
| H37Rv_KO_SugABC | -1.362 | -1.238 |
| H37Rv_KO_MbtN | -1.083 | -1.602 |
| Trans05 | -1.927 | -0.711 |
| macrophage_unactivated | -0.354 | -0.366 |
| IL1 | 0.308 | -0.184 |
| Rapamycin | 0.62 | 0.301 |
| Tcell | -0.121 | -0.831 |
| GMCSF | 1.143 | 0.584 |
| IFNab | 1.466 | -0.284 |
| IFNg | 0.0 | 0.04 |
| IFNg_GMCSF1 | 1.276 | -0.452 |
| Rv1432_day32 | 0.0 | 0.057 |
| Rv1565c_day32 | 0.0 | 0.464 |
| secA2_input | 0.492 | 0.299 |
| delta_Rv3594 | 1.199 | 1.716 |
| delta_Rv3717 | 0.927 | 1.287 |
| delta_Rv3811 | 2.396 | 1.184 |
| delta_Rv0954 | 1.708 | 2.106 |
| PonA1 | 2.331 | 1.384 |
| EccD1_KO | -1.115 | -0.141 |
| EspI_KO | -1.412 | -0.106 |
| PE35_KO | -1.741 | -0.403 |
| PPE68_KO | -1.584 | -0.765 |
| glycerol2 | 0.0 | 0.394 |
| lignocerate | 0.235 | 0.43 |
| oleate | 0.829 | -0.37 |
| phosphatidylcholine | 0.14 | 0.09 |
| acetate | 2.056 | -1.037 |
| glucAc | 0.74 | -0.233 |
| Rv0950ko | 1.028 | -0.112 |
| Rv1096ko | 0.19 | 0.365 |
| Rv3684ko | 0.861 | 0.039 |
| delta_otsA_trehalose | -0.147 | 0.507 |