Top 10 genes with highest correlation to Rv0379/secE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1323/fadA4 | (cc=0.7072) | info on Rv1323/fadA4 |
| Rv3354/- | (cc=0.6778) | info on Rv3354/- |
| Rv2426c/- | (cc=0.6626) | info on Rv2426c/- |
| Rv2007c/fdxA | (cc=0.6618) | info on Rv2007c/fdxA |
| Rv2405/- | (cc=0.6418) | info on Rv2405/- |
| Rv0396/- | (cc=0.6391) | info on Rv0396/- |
| Rv3196/- | (cc=0.6375) | info on Rv3196/- |
| Rv2872/vapC43 | (cc=0.6353) | info on Rv2872/vapC43 |
| Rv0887c/- | (cc=0.6239) | info on Rv0887c/- |
| Rv2499c/- | (cc=0.6141) | info on Rv2499c/- |
Correlation of Rv0379/secE2 with Rv2426c/-
Normalized LFCs for Rv0379/secE2:
(description and provenance of datasets)
| Rv0379/secE2 | Rv2426c/- | |
| Fe_supp_jason_reseq | -0.707 | -0.535 |
| low_pH_jason_reseq | -0.32 | 0.341 |
| NO_jason_reseq | 1.197 | 0.656 |
| B6_jason_reseq | -0.727 | 0.011 |
| MHCII_jason_reseq | -0.542 | -0.104 |
| Isoniazid02 | 0.799 | 0.909 |
| Rifampicin4 | 0.046 | -0.051 |
| Ethambutol3 | 1.3 | 1.734 |
| Meropenem3 | 0.272 | 0.531 |
| Vancomycin16 | 0.44 | 0.379 |
| Rv2680_day32 | -0.692 | -0.393 |
| H37Rv_KO_MarP | -0.339 | -0.151 |
| hypoxia_3wks | -1.703 | -1.216 |
| hypoxia_6wks | 0.597 | -0.351 |
| glycerol | 1.29 | -0.344 |
| cholesterol | 0.307 | -0.157 |
| AJ | 0.178 | 0.43 |
| Bibs02 | 0.943 | -0.028 |
| Bibs02c | 0.562 | 0.978 |
| BL6 | -0.753 | 0.557 |
| BL6a | -0.694 | 0.007 |
| BXD01 | -3.242 | -0.465 |
| BXD010 | -1.486 | -0.01 |
| BXD011 | -2.338 | -0.01 |
| BXD03 | -3.193 | 0.456 |
| BXD04 | -2.154 | -0.156 |
| BXD05 | -2.001 | -0.97 |
| BXD06 | -1.712 | -0.719 |
| BXD07 | -3.111 | -0.702 |
| BXD08 | -2.542 | -0.564 |
| BXD09 | -2.019 | -0.88 |
| CAST | -0.552 | 0.282 |
| CCcont | -1.958 | -0.493 |
| DS01 | 0.289 | 0.453 |
| DS02 | 0.159 | 0.734 |
| DS04 | 0.048 | 1.19 |
| DS0c | -0.13 | 0.121 |
| GP01 | -2.055 | -0.957 |
| GP02 | -2.334 | -1.014 |
| GP0c | -2.237 | -0.216 |
| NOD | -0.937 | 0.861 |
| NZO | -0.759 | -0.15 |
| PWK | 0.681 | 0.26 |
| H37Rv_KO_CtpC | -0.505 | -0.865 |
| H37Rv_KO_CtpD | -0.49 | -0.106 |
| H37Rv_KO_Rv1272 | 0.006 | -0.724 |
| H37Rv_KO_SugABC | -2.379 | -1.551 |
| H37Rv_KO_MbtN | -1.646 | -0.402 |
| Trans05 | -0.513 | -0.228 |
| macrophage_unactivated | 0.035 | -1.291 |
| IL1 | -0.392 | -1.02 |
| Rapamycin | -0.365 | -1.105 |
| Tcell | -1.039 | -0.583 |
| GMCSF | -2.521 | -0.491 |
| IFNab | -1.466 | -1.493 |
| IFNg | -1.048 | -1.072 |
| IFNg_GMCSF1 | 2.118 | -0.958 |
| Rv1432_day32 | 0.18 | 0.215 |
| Rv1565c_day32 | -0.085 | -0.752 |
| secA2_input | -1.49 | -0.499 |
| delta_Rv3594 | 0.078 | -0.413 |
| delta_Rv3717 | -1.111 | -0.206 |
| delta_Rv3811 | 0.843 | -0.055 |
| delta_Rv0954 | 1.454 | 0.6 |
| PonA1 | 0.87 | 0.18 |
| EccD1_KO | -0.02 | 1.023 |
| EspI_KO | 0.319 | 1.124 |
| PE35_KO | 0.055 | 0.601 |
| PPE68_KO | 0.32 | 1.209 |
| glycerol2 | 1.188 | 1.321 |
| lignocerate | 2.25 | 2.516 |
| oleate | 0.0 | -1.121 |
| phosphatidylcholine | 1.401 | 1.76 |
| acetate | 3.712 | 2.826 |
| glucAc | 3.12 | 2.032 |
| Rv0950ko | 3.347 | 0.709 |
| Rv1096ko | 2.925 | 1.809 |
| Rv3684ko | 2.689 | 1.742 |
| delta_otsA_trehalose | -1.235 | -0.332 |