Top 10 genes with highest correlation to Rv0356c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1182/papA3 | (cc=0.5908) | info on Rv1182/papA3 |
| Rv3607c/folB | (cc=0.5747) | info on Rv3607c/folB |
| Rv2559c/- | (cc=0.5718) | info on Rv2559c/- |
| Rv3328c/sigJ | (cc=0.5619) | info on Rv3328c/sigJ |
| Rv1316c/ogt | (cc=0.5553) | info on Rv1316c/ogt |
| Rv2015c/- | (cc=0.5519) | info on Rv2015c/- |
| Rv3824c/papA1 | (cc=0.5479) | info on Rv3824c/papA1 |
| Rv1815/- | (cc=0.5363) | info on Rv1815/- |
| Rv2340c/PE_PGRS39 | (cc=0.5304) | info on Rv2340c/PE_PGRS39 |
| Rv0985c/mscL | (cc=0.529) | info on Rv0985c/mscL |
Correlation of Rv0356c/- with Rv1182/papA3
Normalized LFCs for Rv0356c/-:
(description and provenance of datasets)
| Rv0356c/- | Rv1182/papA3 | |
| Fe_supp_jason_reseq | 0.851 | 0.169 |
| low_pH_jason_reseq | -0.323 | 0.915 |
| NO_jason_reseq | 0.228 | 0.478 |
| B6_jason_reseq | 1.276 | 1.789 |
| MHCII_jason_reseq | 1.932 | 1.842 |
| Isoniazid02 | -0.992 | 0.332 |
| Rifampicin4 | 0.428 | 0.0 |
| Ethambutol3 | 2.255 | 1.685 |
| Meropenem3 | -0.012 | -0.025 |
| Vancomycin16 | -0.199 | 0.212 |
| Rv2680_day32 | -1.263 | -0.193 |
| H37Rv_KO_MarP | 1.075 | 0.574 |
| hypoxia_3wks | -0.905 | -0.69 |
| hypoxia_6wks | -0.812 | -0.422 |
| glycerol | 1.113 | -0.038 |
| cholesterol | -0.369 | 0.461 |
| AJ | 0.906 | 0.197 |
| Bibs02 | 0.256 | 0.356 |
| Bibs02c | -0.133 | -0.136 |
| BL6 | -0.311 | -1.421 |
| BL6a | -0.442 | -1.221 |
| BXD01 | -0.487 | -1.839 |
| BXD010 | -0.738 | -0.665 |
| BXD011 | -0.563 | -1.4 |
| BXD03 | -1.073 | -1.347 |
| BXD04 | -0.065 | -1.975 |
| BXD05 | -0.454 | -1.256 |
| BXD06 | -0.59 | -1.566 |
| BXD07 | -0.58 | -1.599 |
| BXD08 | -1.1 | -1.241 |
| BXD09 | -1.099 | -1.4 |
| CAST | 0.834 | 0.155 |
| CCcont | -0.782 | -1.219 |
| DS01 | 0.794 | 0.385 |
| DS02 | 0.723 | 0.271 |
| DS04 | 0.107 | 0.756 |
| DS0c | -0.198 | 0.245 |
| GP01 | 0.614 | -1.394 |
| GP02 | 0.153 | -1.579 |
| GP0c | -0.273 | -1.63 |
| NOD | 0.805 | 0.952 |
| NZO | 0.475 | 0.013 |
| PWK | 0.368 | 0.668 |
| H37Rv_KO_CtpC | -0.892 | -0.624 |
| H37Rv_KO_CtpD | 0.296 | -1.918 |
| H37Rv_KO_Rv1272 | -0.436 | -0.952 |
| H37Rv_KO_SugABC | -0.692 | -0.837 |
| H37Rv_KO_MbtN | -0.731 | 0.122 |
| Trans05 | -0.351 | 0.191 |
| macrophage_unactivated | -1.203 | -2.039 |
| IL1 | -0.97 | -0.718 |
| Rapamycin | -1.608 | -0.967 |
| Tcell | -1.284 | -2.105 |
| GMCSF | -0.026 | -1.41 |
| IFNab | -1.318 | -1.953 |
| IFNg | -0.874 | -2.793 |
| IFNg_GMCSF1 | -0.905 | -1.609 |
| Rv1432_day32 | -0.172 | -0.508 |
| Rv1565c_day32 | -1.369 | 0.088 |
| secA2_input | -0.988 | 0.0 |
| delta_Rv3594 | 0.021 | 0.502 |
| delta_Rv3717 | 0.034 | -0.268 |
| delta_Rv3811 | 0.232 | 0.827 |
| delta_Rv0954 | 0.137 | 0.24 |
| PonA1 | 1.064 | -0.067 |
| EccD1_KO | 0.881 | 0.207 |
| EspI_KO | -0.248 | 0.75 |
| PE35_KO | 0.298 | 1.21 |
| PPE68_KO | 0.717 | 1.011 |
| glycerol2 | -0.024 | 0.518 |
| lignocerate | -0.153 | 0.728 |
| oleate | -0.448 | 0.071 |
| phosphatidylcholine | -0.228 | 0.171 |
| acetate | 0.231 | -0.153 |
| glucAc | -0.168 | -0.356 |
| Rv0950ko | -0.148 | -1.152 |
| Rv1096ko | -0.76 | -0.959 |
| Rv3684ko | -1.464 | -1.624 |
| delta_otsA_trehalose | 1.351 | -0.651 |