Top 10 genes with highest correlation to Rv0346c/ansP2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2127/ansP1 | (cc=0.6229) | info on Rv2127/ansP1 |
| Rv0476/- | (cc=0.5573) | info on Rv0476/- |
| Rv0829/- | (cc=0.5548) | info on Rv0829/- |
| Rv0349/- | (cc=0.5456) | info on Rv0349/- |
| Rv3253c/- | (cc=0.5323) | info on Rv3253c/- |
| Rv2142c/parE2 | (cc=0.4873) | info on Rv2142c/parE2 |
| Rv0458/- | (cc=0.4848) | info on Rv0458/- |
| Rv1538c/ansA | (cc=0.4834) | info on Rv1538c/ansA |
| Rv3117/cysA3 | (cc=0.4755) | info on Rv3117/cysA3 |
| Rv1210/tagA | (cc=0.4752) | info on Rv1210/tagA |
Correlation of Rv0346c/ansP2 with Rv0829/-
Normalized LFCs for Rv0346c/ansP2:
(description and provenance of datasets)
| Rv0346c/ansP2 | Rv0829/- | |
| Fe_supp_jason_reseq | -2.144 | -1.781 |
| low_pH_jason_reseq | -1.241 | -1.298 |
| NO_jason_reseq | -1.045 | 0.362 |
| B6_jason_reseq | -1.311 | -0.678 |
| MHCII_jason_reseq | -1.572 | -0.448 |
| Isoniazid02 | -1.132 | 0.154 |
| Rifampicin4 | 1.335 | -0.328 |
| Ethambutol3 | 1.181 | 0.315 |
| Meropenem3 | 0.052 | 0.246 |
| Vancomycin16 | -0.093 | -0.801 |
| Rv2680_day32 | 0.412 | -0.548 |
| H37Rv_KO_MarP | -0.648 | 0.308 |
| hypoxia_3wks | -0.614 | 0.251 |
| hypoxia_6wks | 1.662 | -0.257 |
| glycerol | -5.051 | -2.313 |
| cholesterol | -4.096 | -1.522 |
| AJ | -0.45 | 0.378 |
| Bibs02 | -0.146 | 0.717 |
| Bibs02c | -0.627 | -0.349 |
| BL6 | -0.755 | 0.106 |
| BL6a | -0.418 | -0.066 |
| BXD01 | -0.141 | -0.089 |
| BXD010 | 0.227 | -0.213 |
| BXD011 | 0.113 | -0.465 |
| BXD03 | 0.421 | 0.108 |
| BXD04 | 0.37 | -0.966 |
| BXD05 | 0.525 | 0.53 |
| BXD06 | 0.545 | -0.119 |
| BXD07 | 0.025 | -0.357 |
| BXD08 | -0.307 | -0.571 |
| BXD09 | -0.119 | -0.372 |
| CAST | 0.195 | 0.093 |
| CCcont | -0.805 | 0.025 |
| DS01 | -0.438 | 0.477 |
| DS02 | -0.939 | -0.889 |
| DS04 | 0.818 | 0.999 |
| DS0c | -0.677 | -0.2 |
| GP01 | -0.042 | -0.368 |
| GP02 | -0.829 | 0.967 |
| GP0c | -0.486 | -0.569 |
| NOD | -0.368 | -0.441 |
| NZO | -0.019 | 0.564 |
| PWK | 1.262 | 0.939 |
| H37Rv_KO_CtpC | -0.565 | -0.115 |
| H37Rv_KO_CtpD | -0.267 | -0.24 |
| H37Rv_KO_Rv1272 | -0.8 | -0.338 |
| H37Rv_KO_SugABC | -0.993 | 0.738 |
| H37Rv_KO_MbtN | 0.546 | -0.499 |
| Trans05 | -0.228 | -0.074 |
| macrophage_unactivated | -0.221 | -0.243 |
| IL1 | 0.095 | -0.217 |
| Rapamycin | -0.071 | -0.589 |
| Tcell | 0.951 | 0.134 |
| GMCSF | 0.639 | 0.304 |
| IFNab | -0.541 | -0.354 |
| IFNg | 0.337 | -0.051 |
| IFNg_GMCSF1 | 0.537 | 0.449 |
| Rv1432_day32 | 1.107 | 1.229 |
| Rv1565c_day32 | -1.156 | 0.0 |
| secA2_input | -0.54 | -0.089 |
| delta_Rv3594 | 0.809 | 1.649 |
| delta_Rv3717 | 0.938 | 1.836 |
| delta_Rv3811 | 0.828 | 2.104 |
| delta_Rv0954 | 0.061 | 1.512 |
| PonA1 | 0.381 | 0.794 |
| EccD1_KO | -0.187 | 0.411 |
| EspI_KO | -0.374 | 0.633 |
| PE35_KO | -1.059 | 0.12 |
| PPE68_KO | -0.723 | 0.339 |
| glycerol2 | 1.225 | 0.933 |
| lignocerate | -0.153 | 1.142 |
| oleate | 2.562 | 0.216 |
| phosphatidylcholine | 0.0 | 1.0 |
| acetate | 0.369 | 0.673 |
| glucAc | 0.685 | 1.027 |
| Rv0950ko | 0.353 | 0.16 |
| Rv1096ko | 0.437 | 1.948 |
| Rv3684ko | 0.242 | 0.079 |
| delta_otsA_trehalose | 0.449 | -0.385 |