Top 10 genes with highest correlation to Rv0344c/lpqJ:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2031c/hspX | (cc=0.6506) | info on Rv2031c/hspX |
| Rv2030c/- | (cc=0.6014) | info on Rv2030c/- |
| Rv1069c/- | (cc=0.5513) | info on Rv1069c/- |
| Rv0908/ctpE | (cc=0.5109) | info on Rv0908/ctpE |
| Rv1732c/- | (cc=0.4732) | info on Rv1732c/- |
| Rv1634/- | (cc=0.44) | info on Rv1634/- |
| Rv1070c/echA8 | (cc=0.438) | info on Rv1070c/echA8 |
| Rv2708c/- | (cc=0.4309) | info on Rv2708c/- |
| Rv0904c/accD3 | (cc=0.4251) | info on Rv0904c/accD3 |
| Rv3420c/rimI | (cc=0.4206) | info on Rv3420c/rimI |
Correlation of Rv0344c/lpqJ with Rv1732c/-
Normalized LFCs for Rv0344c/lpqJ:
(description and provenance of datasets)
| Rv0344c/lpqJ | Rv1732c/- | |
| Fe_supp_jason_reseq | -0.603 | 0.736 |
| low_pH_jason_reseq | -0.412 | 0.219 |
| NO_jason_reseq | 0.37 | 1.769 |
| B6_jason_reseq | 0.456 | -1.269 |
| MHCII_jason_reseq | -0.746 | -0.789 |
| Isoniazid02 | 0.105 | 0.659 |
| Rifampicin4 | 0.222 | 0.39 |
| Ethambutol3 | 0.472 | 0.192 |
| Meropenem3 | 0.709 | 1.379 |
| Vancomycin16 | 1.571 | 0.862 |
| Rv2680_day32 | 0.027 | 0.399 |
| H37Rv_KO_MarP | 0.763 | 0.745 |
| hypoxia_3wks | -5.802 | -1.842 |
| hypoxia_6wks | -1.706 | -1.9 |
| glycerol | 0.01 | 0.322 |
| cholesterol | -0.504 | 0.041 |
| AJ | -0.148 | 1.613 |
| Bibs02 | -0.685 | -0.107 |
| Bibs02c | -0.994 | -0.429 |
| BL6 | -0.575 | -0.999 |
| BL6a | -0.624 | -1.983 |
| BXD01 | -0.775 | -0.571 |
| BXD010 | -0.561 | -2.21 |
| BXD011 | 0.089 | -0.504 |
| BXD03 | -1.166 | -0.453 |
| BXD04 | 0.012 | -1.193 |
| BXD05 | -1.047 | -1.299 |
| BXD06 | -0.727 | -0.706 |
| BXD07 | -0.445 | -1.287 |
| BXD08 | -0.41 | 0.0 |
| BXD09 | -0.998 | -0.959 |
| CAST | -0.681 | -0.726 |
| CCcont | -1.533 | -0.654 |
| DS01 | -0.539 | -0.568 |
| DS02 | -0.922 | -0.128 |
| DS04 | -0.513 | 0.284 |
| DS0c | -0.966 | -1.097 |
| GP01 | -0.232 | 0.041 |
| GP02 | -0.383 | -0.69 |
| GP0c | -0.259 | -0.72 |
| NOD | 0.085 | -0.841 |
| NZO | 2.076 | 0.504 |
| PWK | -0.593 | -1.893 |
| H37Rv_KO_CtpC | -0.314 | -0.512 |
| H37Rv_KO_CtpD | -0.367 | -0.64 |
| H37Rv_KO_Rv1272 | 0.085 | -0.815 |
| H37Rv_KO_SugABC | -0.501 | 0.471 |
| H37Rv_KO_MbtN | -0.211 | -0.923 |
| Trans05 | -0.111 | -1.577 |
| macrophage_unactivated | -1.341 | 0.098 |
| IL1 | -0.552 | 0.0 |
| Rapamycin | -0.371 | -0.73 |
| Tcell | -1.219 | -0.658 |
| GMCSF | 0.364 | -1.265 |
| IFNab | -1.484 | 1.439 |
| IFNg | -1.312 | -2.055 |
| IFNg_GMCSF1 | -0.723 | -0.748 |
| Rv1432_day32 | -0.692 | -0.846 |
| Rv1565c_day32 | 1.444 | 0.494 |
| secA2_input | 0.366 | 0.131 |
| delta_Rv3594 | 0.489 | 1.53 |
| delta_Rv3717 | -0.025 | 0.453 |
| delta_Rv3811 | -0.217 | 1.063 |
| delta_Rv0954 | 0.149 | 1.31 |
| PonA1 | -0.023 | 0.6 |
| EccD1_KO | 0.737 | 0.931 |
| EspI_KO | 0.847 | -0.151 |
| PE35_KO | -0.3 | 0.099 |
| PPE68_KO | -0.106 | 0.576 |
| glycerol2 | -0.553 | -0.091 |
| lignocerate | -0.32 | -0.726 |
| oleate | 0.068 | 0.0 |
| phosphatidylcholine | -0.277 | -0.662 |
| acetate | -0.352 | -0.738 |
| glucAc | -1.06 | -0.459 |
| Rv0950ko | 0.422 | 0.549 |
| Rv1096ko | 0.998 | 0.606 |
| Rv3684ko | 1.025 | 0.717 |
| delta_otsA_trehalose | -0.517 | -0.691 |