Top 10 genes with highest correlation to Rv0327c/cyp135A1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0567/- | (cc=0.5657) | info on Rv0567/- |
| Rv3445c/esxU | (cc=0.5568) | info on Rv3445c/esxU |
| Rv1200/- | (cc=0.5344) | info on Rv1200/- |
| Rv3896c/- | (cc=0.5299) | info on Rv3896c/- |
| Rv0134/ephF | (cc=0.5183) | info on Rv0134/ephF |
| Rv2644c/- | (cc=0.5009) | info on Rv2644c/- |
| Rv2919c/glnB | (cc=0.5007) | info on Rv2919c/glnB |
| Rv3100c/smpB | (cc=0.4928) | info on Rv3100c/smpB |
| Rv0843/- | (cc=0.4847) | info on Rv0843/- |
| Rv0441c/- | (cc=0.4595) | info on Rv0441c/- |
Correlation of Rv0327c/cyp135A1 with Rv0134/ephF
Normalized LFCs for Rv0327c/cyp135A1:
(description and provenance of datasets)
| Rv0327c/cyp135A1 | Rv0134/ephF | |
| Fe_supp_jason_reseq | 0.12 | -0.568 |
| low_pH_jason_reseq | 0.095 | -0.688 |
| NO_jason_reseq | -0.433 | 0.391 |
| B6_jason_reseq | 1.032 | 0.413 |
| MHCII_jason_reseq | 2.121 | 0.941 |
| Isoniazid02 | -0.463 | -0.345 |
| Rifampicin4 | -0.615 | 0.0 |
| Ethambutol3 | -0.173 | -0.461 |
| Meropenem3 | -0.252 | 0.271 |
| Vancomycin16 | -0.122 | -0.273 |
| Rv2680_day32 | -0.688 | -0.09 |
| H37Rv_KO_MarP | -0.086 | 0.213 |
| hypoxia_3wks | -0.55 | -0.478 |
| hypoxia_6wks | -0.403 | -0.106 |
| glycerol | -0.455 | 0.168 |
| cholesterol | -0.52 | -0.859 |
| AJ | 0.605 | 0.077 |
| Bibs02 | -0.242 | -0.449 |
| Bibs02c | 1.023 | 0.759 |
| BL6 | 0.414 | 0.587 |
| BL6a | 0.393 | 0.639 |
| BXD01 | -0.636 | -0.265 |
| BXD010 | 0.151 | -0.255 |
| BXD011 | -0.136 | 0.421 |
| BXD03 | -0.372 | 0.226 |
| BXD04 | -0.573 | -0.24 |
| BXD05 | -0.44 | 0.463 |
| BXD06 | -0.367 | 0.175 |
| BXD07 | -0.482 | -0.048 |
| BXD08 | -0.021 | 0.152 |
| BXD09 | -0.401 | 0.292 |
| CAST | 0.335 | 0.792 |
| CCcont | -0.308 | -0.331 |
| DS01 | 0.108 | 0.229 |
| DS02 | -0.104 | 0.249 |
| DS04 | -0.514 | 1.152 |
| DS0c | 0.669 | 0.445 |
| GP01 | 0.202 | 0.371 |
| GP02 | 0.999 | 1.127 |
| GP0c | -0.219 | 0.279 |
| NOD | -0.22 | 0.404 |
| NZO | -0.064 | 0.345 |
| PWK | 0.271 | 0.566 |
| H37Rv_KO_CtpC | -1.103 | -0.114 |
| H37Rv_KO_CtpD | -0.273 | -0.348 |
| H37Rv_KO_Rv1272 | -0.778 | -0.224 |
| H37Rv_KO_SugABC | -1.177 | 0.588 |
| H37Rv_KO_MbtN | -0.902 | 0.961 |
| Trans05 | -0.346 | -0.302 |
| macrophage_unactivated | 0.65 | 0.069 |
| IL1 | -0.341 | 0.018 |
| Rapamycin | -0.448 | -0.034 |
| Tcell | 0.222 | 0.072 |
| GMCSF | 0.481 | 1.098 |
| IFNab | 0.245 | -0.121 |
| IFNg | 0.11 | 0.596 |
| IFNg_GMCSF1 | 0.76 | 1.037 |
| Rv1432_day32 | 0.0 | 0.224 |
| Rv1565c_day32 | 0.398 | 0.188 |
| secA2_input | -0.033 | 0.297 |
| delta_Rv3594 | -0.791 | -0.197 |
| delta_Rv3717 | -0.268 | 0.127 |
| delta_Rv3811 | -0.457 | -0.132 |
| delta_Rv0954 | -0.16 | -0.098 |
| PonA1 | 0.557 | 0.698 |
| EccD1_KO | 0.457 | 0.421 |
| EspI_KO | -0.094 | -0.351 |
| PE35_KO | 0.362 | -0.621 |
| PPE68_KO | 0.538 | -0.682 |
| glycerol2 | 0.298 | 0.265 |
| lignocerate | 1.14 | 0.952 |
| oleate | -0.578 | -0.6 |
| phosphatidylcholine | 0.604 | 0.326 |
| acetate | 1.119 | 0.51 |
| glucAc | 0.696 | 0.706 |
| Rv0950ko | 1.173 | 0.986 |
| Rv1096ko | 0.627 | 1.692 |
| Rv3684ko | 0.96 | 1.657 |
| delta_otsA_trehalose | -1.732 | -0.613 |