Top 10 genes with highest correlation to Rv0276/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0303/- | (cc=0.5835) | info on Rv0303/- |
| Rv0268c/- | (cc=0.5686) | info on Rv0268c/- |
| Rv0650/- | (cc=0.5295) | info on Rv0650/- |
| Rv0347/- | (cc=0.5126) | info on Rv0347/- |
| Rv0447c/ufaA1 | (cc=0.5069) | info on Rv0447c/ufaA1 |
| Rv2395/- | (cc=0.4863) | info on Rv2395/- |
| Rv2771c/- | (cc=0.4781) | info on Rv2771c/- |
| Rv3070/- | (cc=0.4657) | info on Rv3070/- |
| Rv0851c/- | (cc=0.4607) | info on Rv0851c/- |
| Rv3839/- | (cc=0.4571) | info on Rv3839/- |
Correlation of Rv0276/- with Rv0303/-
Normalized LFCs for Rv0276/-:
(description and provenance of datasets)
| Rv0276/- | Rv0303/- | |
| Fe_supp_jason_reseq | -0.807 | 0.071 |
| low_pH_jason_reseq | -0.855 | -0.577 |
| NO_jason_reseq | -0.113 | -0.494 |
| B6_jason_reseq | 0.322 | 0.857 |
| MHCII_jason_reseq | 0.118 | -0.077 |
| Isoniazid02 | 0.141 | -0.162 |
| Rifampicin4 | -0.23 | -0.13 |
| Ethambutol3 | 0.238 | -0.206 |
| Meropenem3 | -0.272 | -0.156 |
| Vancomycin16 | 0.478 | -0.127 |
| Rv2680_day32 | 0.73 | 0.829 |
| H37Rv_KO_MarP | 0.452 | 0.241 |
| hypoxia_3wks | -0.12 | 0.136 |
| hypoxia_6wks | -0.194 | 0.66 |
| glycerol | -0.297 | -0.13 |
| cholesterol | 0.193 | -0.764 |
| AJ | 0.277 | -0.343 |
| Bibs02 | 0.335 | -0.65 |
| Bibs02c | 0.108 | 0.853 |
| BL6 | 0.3 | 0.246 |
| BL6a | 0.112 | 0.098 |
| BXD01 | -0.035 | -0.735 |
| BXD010 | -0.135 | -0.357 |
| BXD011 | 0.347 | -0.805 |
| BXD03 | -0.241 | -0.487 |
| BXD04 | 0.613 | -0.092 |
| BXD05 | 0.451 | -0.316 |
| BXD06 | -0.164 | -0.356 |
| BXD07 | 0.421 | -0.369 |
| BXD08 | -0.287 | -1.018 |
| BXD09 | 0.142 | -0.325 |
| CAST | 0.619 | 0.317 |
| CCcont | -0.211 | -0.969 |
| DS01 | 0.525 | -0.075 |
| DS02 | 0.714 | 0.325 |
| DS04 | 0.177 | 0.24 |
| DS0c | 0.187 | 0.239 |
| GP01 | 0.094 | -0.658 |
| GP02 | -1.435 | -1.356 |
| GP0c | -0.51 | -0.727 |
| NOD | 1.435 | 0.436 |
| NZO | -0.075 | -0.376 |
| PWK | 0.746 | 0.159 |
| H37Rv_KO_CtpC | 0.067 | -0.116 |
| H37Rv_KO_CtpD | -0.282 | 0.669 |
| H37Rv_KO_Rv1272 | 0.195 | 0.418 |
| H37Rv_KO_SugABC | -0.128 | -1.585 |
| H37Rv_KO_MbtN | -0.898 | -1.073 |
| Trans05 | 0.061 | -0.511 |
| macrophage_unactivated | 0.139 | -0.177 |
| IL1 | 0.706 | -0.092 |
| Rapamycin | -0.258 | -0.733 |
| Tcell | -0.098 | -0.287 |
| GMCSF | -0.201 | -0.301 |
| IFNab | 0.112 | -0.856 |
| IFNg | 0.174 | -0.083 |
| IFNg_GMCSF1 | 0.789 | -0.984 |
| Rv1432_day32 | -0.1 | 0.31 |
| Rv1565c_day32 | -0.046 | 0.028 |
| secA2_input | 0.928 | 0.554 |
| delta_Rv3594 | -0.441 | -0.58 |
| delta_Rv3717 | -0.622 | -0.312 |
| delta_Rv3811 | -0.669 | -0.739 |
| delta_Rv0954 | 0.557 | -0.868 |
| PonA1 | -0.44 | -0.119 |
| EccD1_KO | -0.26 | -0.197 |
| EspI_KO | -0.385 | -0.836 |
| PE35_KO | -0.738 | -0.744 |
| PPE68_KO | -0.618 | -0.733 |
| glycerol2 | 0.135 | -0.067 |
| lignocerate | 0.418 | -0.311 |
| oleate | 0.262 | 0.024 |
| phosphatidylcholine | 0.28 | -0.126 |
| acetate | -0.083 | -0.603 |
| glucAc | 0.051 | -0.315 |
| Rv0950ko | 1.604 | 0.651 |
| Rv1096ko | 1.514 | 1.095 |
| Rv3684ko | 1.837 | 0.956 |
| delta_otsA_trehalose | 1.079 | 1.464 |