Top 10 genes with highest correlation to Rv0266c/oplA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0103c/ctpB | (cc=0.6253) | info on Rv0103c/ctpB |
| Rv0228/- | (cc=0.5947) | info on Rv0228/- |
| Rv0368c/- | (cc=0.5917) | info on Rv0368c/- |
| Rv0271c/fadE6 | (cc=0.5904) | info on Rv0271c/fadE6 |
| Rv0648/- | (cc=0.5835) | info on Rv0648/- |
| Rv0470A/- | (cc=0.5807) | info on Rv0470A/- |
| Rv3366/spoU | (cc=0.5732) | info on Rv3366/spoU |
| Rv3196/- | (cc=0.5671) | info on Rv3196/- |
| Rv2636/- | (cc=0.555) | info on Rv2636/- |
| Rv3506/fadD17 | (cc=0.5529) | info on Rv3506/fadD17 |
Correlation of Rv0266c/oplA with Rv3196/-
Normalized LFCs for Rv0266c/oplA:
(description and provenance of datasets)
| Rv0266c/oplA | Rv3196/- | |
| Fe_supp_jason_reseq | -0.467 | 0.182 |
| low_pH_jason_reseq | -0.403 | -1.014 |
| NO_jason_reseq | 0.034 | 0.937 |
| B6_jason_reseq | 0.552 | 0.371 |
| MHCII_jason_reseq | 0.24 | 0.676 |
| Isoniazid02 | -0.349 | 1.017 |
| Rifampicin4 | -0.097 | -0.179 |
| Ethambutol3 | -0.212 | 0.238 |
| Meropenem3 | -0.097 | 0.262 |
| Vancomycin16 | -0.233 | -0.297 |
| Rv2680_day32 | 0.035 | -1.033 |
| H37Rv_KO_MarP | 0.468 | 0.437 |
| hypoxia_3wks | 0.0 | -0.618 |
| hypoxia_6wks | -0.274 | -0.426 |
| glycerol | 0.711 | 0.399 |
| cholesterol | -0.016 | 0.242 |
| AJ | 0.099 | -0.195 |
| Bibs02 | 0.172 | 0.507 |
| Bibs02c | -0.512 | -0.023 |
| BL6 | -0.207 | -0.425 |
| BL6a | -0.522 | -1.076 |
| BXD01 | -0.658 | -0.504 |
| BXD010 | -1.178 | -1.253 |
| BXD011 | -0.937 | -0.267 |
| BXD03 | -0.235 | -0.799 |
| BXD04 | -0.46 | -1.527 |
| BXD05 | -0.412 | -1.121 |
| BXD06 | -0.715 | -0.7 |
| BXD07 | -0.846 | -0.961 |
| BXD08 | -0.143 | -1.099 |
| BXD09 | -0.752 | -1.533 |
| CAST | 0.153 | 0.417 |
| CCcont | -0.763 | -0.53 |
| DS01 | -0.282 | 0.269 |
| DS02 | 0.0 | -0.164 |
| DS04 | 0.839 | 0.347 |
| DS0c | 0.189 | 0.332 |
| GP01 | -0.442 | 0.206 |
| GP02 | -0.196 | -1.388 |
| GP0c | -0.664 | -1.051 |
| NOD | -0.667 | -0.103 |
| NZO | 0.173 | -0.266 |
| PWK | -0.036 | -0.318 |
| H37Rv_KO_CtpC | -0.83 | -1.181 |
| H37Rv_KO_CtpD | 0.578 | 0.988 |
| H37Rv_KO_Rv1272 | -0.956 | 0.011 |
| H37Rv_KO_SugABC | -0.135 | -0.154 |
| H37Rv_KO_MbtN | -0.829 | -1.502 |
| Trans05 | 0.105 | -0.68 |
| macrophage_unactivated | -0.597 | -0.521 |
| IL1 | -0.442 | -0.249 |
| Rapamycin | -0.387 | -0.338 |
| Tcell | -0.433 | -0.316 |
| GMCSF | 0.111 | -0.951 |
| IFNab | -0.088 | -0.499 |
| IFNg | 0.019 | -0.206 |
| IFNg_GMCSF1 | 0.154 | -0.814 |
| Rv1432_day32 | 0.28 | 0.345 |
| Rv1565c_day32 | 0.231 | 1.488 |
| secA2_input | 0.645 | 0.546 |
| delta_Rv3594 | -0.288 | 0.647 |
| delta_Rv3717 | -0.138 | -0.814 |
| delta_Rv3811 | -0.452 | 0.077 |
| delta_Rv0954 | 0.278 | 0.567 |
| PonA1 | -0.083 | -0.127 |
| EccD1_KO | -0.536 | 0.069 |
| EspI_KO | -0.445 | 0.833 |
| PE35_KO | -0.513 | -0.125 |
| PPE68_KO | -0.781 | -0.256 |
| glycerol2 | 0.27 | 0.765 |
| lignocerate | 0.476 | 1.058 |
| oleate | 0.418 | 0.262 |
| phosphatidylcholine | 0.392 | 0.658 |
| acetate | 0.076 | 0.569 |
| glucAc | 0.148 | 1.645 |
| Rv0950ko | 0.458 | 0.338 |
| Rv1096ko | 0.6 | 1.019 |
| Rv3684ko | 0.95 | 0.416 |
| delta_otsA_trehalose | -0.123 | -0.251 |