Top 10 genes with highest correlation to Rv0266c/oplA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0103c/ctpB | (cc=0.6253) | info on Rv0103c/ctpB |
| Rv0228/- | (cc=0.5947) | info on Rv0228/- |
| Rv0368c/- | (cc=0.5917) | info on Rv0368c/- |
| Rv0271c/fadE6 | (cc=0.5904) | info on Rv0271c/fadE6 |
| Rv0648/- | (cc=0.5835) | info on Rv0648/- |
| Rv0470A/- | (cc=0.5807) | info on Rv0470A/- |
| Rv3366/spoU | (cc=0.5732) | info on Rv3366/spoU |
| Rv3196/- | (cc=0.5671) | info on Rv3196/- |
| Rv2636/- | (cc=0.555) | info on Rv2636/- |
| Rv3506/fadD17 | (cc=0.5529) | info on Rv3506/fadD17 |
Correlation of Rv0266c/oplA with Rv0228/-
Normalized LFCs for Rv0266c/oplA:
(description and provenance of datasets)
| Rv0266c/oplA | Rv0228/- | |
| Fe_supp_jason_reseq | -0.467 | 1.07 |
| low_pH_jason_reseq | -0.403 | 0.0 |
| NO_jason_reseq | 0.034 | 0.0 |
| B6_jason_reseq | 0.552 | 1.759 |
| MHCII_jason_reseq | 0.24 | 0.37 |
| Isoniazid02 | -0.349 | -0.167 |
| Rifampicin4 | -0.097 | 0.558 |
| Ethambutol3 | -0.212 | -0.14 |
| Meropenem3 | -0.097 | 0.128 |
| Vancomycin16 | -0.233 | 0.796 |
| Rv2680_day32 | 0.035 | 0.0 |
| H37Rv_KO_MarP | 0.468 | -0.684 |
| hypoxia_3wks | 0.0 | 0.678 |
| hypoxia_6wks | -0.274 | -0.626 |
| glycerol | 0.711 | 0.585 |
| cholesterol | -0.016 | 0.915 |
| AJ | 0.099 | 0.05 |
| Bibs02 | 0.172 | 0.56 |
| Bibs02c | -0.512 | -1.66 |
| BL6 | -0.207 | -2.023 |
| BL6a | -0.522 | -2.66 |
| BXD01 | -0.658 | -2.107 |
| BXD010 | -1.178 | -2.072 |
| BXD011 | -0.937 | -2.06 |
| BXD03 | -0.235 | -2.187 |
| BXD04 | -0.46 | -2.0 |
| BXD05 | -0.412 | -2.177 |
| BXD06 | -0.715 | -2.159 |
| BXD07 | -0.846 | -2.24 |
| BXD08 | -0.143 | -2.151 |
| BXD09 | -0.752 | -2.273 |
| CAST | 0.153 | -0.389 |
| CCcont | -0.763 | -2.131 |
| DS01 | -0.282 | -0.727 |
| DS02 | 0.0 | -1.942 |
| DS04 | 0.839 | 0.779 |
| DS0c | 0.189 | -1.431 |
| GP01 | -0.442 | -1.597 |
| GP02 | -0.196 | -1.346 |
| GP0c | -0.664 | -2.103 |
| NOD | -0.667 | -0.83 |
| NZO | 0.173 | -0.285 |
| PWK | -0.036 | 0.168 |
| H37Rv_KO_CtpC | -0.83 | -2.628 |
| H37Rv_KO_CtpD | 0.578 | -1.922 |
| H37Rv_KO_Rv1272 | -0.956 | -2.281 |
| H37Rv_KO_SugABC | -0.135 | -1.503 |
| H37Rv_KO_MbtN | -0.829 | -1.667 |
| Trans05 | 0.105 | -1.983 |
| macrophage_unactivated | -0.597 | -2.923 |
| IL1 | -0.442 | -2.747 |
| Rapamycin | -0.387 | -2.842 |
| Tcell | -0.433 | -3.017 |
| GMCSF | 0.111 | -2.445 |
| IFNab | -0.088 | -2.799 |
| IFNg | 0.019 | -2.475 |
| IFNg_GMCSF1 | 0.154 | -1.386 |
| Rv1432_day32 | 0.28 | 0.0 |
| Rv1565c_day32 | 0.231 | 0.0 |
| secA2_input | 0.645 | 1.565 |
| delta_Rv3594 | -0.288 | 0.402 |
| delta_Rv3717 | -0.138 | 0.0 |
| delta_Rv3811 | -0.452 | 0.205 |
| delta_Rv0954 | 0.278 | 0.0 |
| PonA1 | -0.083 | 0.0 |
| EccD1_KO | -0.536 | -0.865 |
| EspI_KO | -0.445 | -0.359 |
| PE35_KO | -0.513 | -0.368 |
| PPE68_KO | -0.781 | -0.841 |
| glycerol2 | 0.27 | 0.0 |
| lignocerate | 0.476 | 0.591 |
| oleate | 0.418 | 0.0 |
| phosphatidylcholine | 0.392 | 0.193 |
| acetate | 0.076 | 0.0 |
| glucAc | 0.148 | 0.0 |
| Rv0950ko | 0.458 | 0.793 |
| Rv1096ko | 0.6 | 1.143 |
| Rv3684ko | 0.95 | 0.452 |
| delta_otsA_trehalose | -0.123 | 0.0 |