Top 10 genes with highest correlation to Rv0258c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2238c/ahpE | (cc=0.5844) | info on Rv2238c/ahpE |
| Rv1736c/narX | (cc=0.5499) | info on Rv1736c/narX |
| Rv3226c/- | (cc=0.5259) | info on Rv3226c/- |
| Rv0080/- | (cc=0.5117) | info on Rv0080/- |
| Rv3294c/- | (cc=0.4912) | info on Rv3294c/- |
| Rv2636/- | (cc=0.4869) | info on Rv2636/- |
| Rv2687c/- | (cc=0.4866) | info on Rv2687c/- |
| Rv1940/ribA1 | (cc=0.4759) | info on Rv1940/ribA1 |
| Rv1843c/guaB1 | (cc=0.4729) | info on Rv1843c/guaB1 |
| Rv1882c/- | (cc=0.4701) | info on Rv1882c/- |
Correlation of Rv0258c/- with Rv1882c/-
Normalized LFCs for Rv0258c/-:
(description and provenance of datasets)
| Rv0258c/- | Rv1882c/- | |
| Fe_supp_jason_reseq | -1.036 | 1.157 |
| low_pH_jason_reseq | -0.515 | -0.606 |
| NO_jason_reseq | -1.189 | -0.029 |
| B6_jason_reseq | 0.119 | 0.272 |
| MHCII_jason_reseq | 0.693 | 0.707 |
| Isoniazid02 | 0.413 | 0.179 |
| Rifampicin4 | -0.173 | -0.845 |
| Ethambutol3 | -0.118 | 0.218 |
| Meropenem3 | 0.212 | 0.199 |
| Vancomycin16 | 1.016 | -0.141 |
| Rv2680_day32 | 0.66 | -0.219 |
| H37Rv_KO_MarP | 0.214 | 0.676 |
| hypoxia_3wks | 0.0 | -0.247 |
| hypoxia_6wks | -1.013 | -0.255 |
| glycerol | -0.664 | -0.238 |
| cholesterol | 0.362 | 0.063 |
| AJ | -0.286 | 0.259 |
| Bibs02 | -0.26 | 0.204 |
| Bibs02c | 0.0 | -0.082 |
| BL6 | -2.406 | -0.31 |
| BL6a | -0.281 | -0.606 |
| BXD01 | -2.047 | -0.493 |
| BXD010 | -2.336 | -0.628 |
| BXD011 | -2.002 | -0.311 |
| BXD03 | -2.601 | -0.446 |
| BXD04 | -2.256 | -0.55 |
| BXD05 | -2.116 | -0.465 |
| BXD06 | -1.912 | -0.015 |
| BXD07 | -1.174 | -0.338 |
| BXD08 | -2.091 | -0.46 |
| BXD09 | -2.435 | -0.696 |
| CAST | 0.452 | -0.205 |
| CCcont | -2.872 | -0.393 |
| DS01 | -0.57 | 0.055 |
| DS02 | 0.811 | -0.228 |
| DS04 | -1.573 | -0.076 |
| DS0c | 0.782 | -0.165 |
| GP01 | 0.109 | 0.151 |
| GP02 | -0.292 | 0.244 |
| GP0c | -1.862 | -0.549 |
| NOD | 0.28 | 0.556 |
| NZO | 0.649 | 0.325 |
| PWK | 0.095 | -0.149 |
| H37Rv_KO_CtpC | 0.447 | 0.202 |
| H37Rv_KO_CtpD | -1.393 | -0.863 |
| H37Rv_KO_Rv1272 | 0.091 | 0.366 |
| H37Rv_KO_SugABC | -1.557 | 0.006 |
| H37Rv_KO_MbtN | -1.039 | 0.64 |
| Trans05 | -0.113 | -0.281 |
| macrophage_unactivated | 0.0 | -0.051 |
| IL1 | -0.905 | 0.273 |
| Rapamycin | 0.402 | 0.129 |
| Tcell | -0.994 | 0.283 |
| GMCSF | -1.827 | 0.283 |
| IFNab | 0.203 | -0.063 |
| IFNg | -1.849 | 0.056 |
| IFNg_GMCSF1 | 2.69 | 0.804 |
| Rv1432_day32 | 0.0 | 0.546 |
| Rv1565c_day32 | -0.218 | 0.1 |
| secA2_input | -2.055 | -0.365 |
| delta_Rv3594 | -0.332 | -0.207 |
| delta_Rv3717 | -0.427 | -0.042 |
| delta_Rv3811 | -0.845 | -0.581 |
| delta_Rv0954 | -0.044 | -0.412 |
| PonA1 | -2.125 | -0.294 |
| EccD1_KO | -1.519 | -0.145 |
| EspI_KO | -0.291 | -0.391 |
| PE35_KO | -1.765 | -0.977 |
| PPE68_KO | -1.062 | -0.95 |
| glycerol2 | -0.531 | 0.923 |
| lignocerate | -0.293 | 0.94 |
| oleate | -0.537 | 0.176 |
| phosphatidylcholine | -0.531 | 0.951 |
| acetate | 0.178 | 0.397 |
| glucAc | -0.392 | 0.288 |
| Rv0950ko | -1.004 | 0.57 |
| Rv1096ko | -0.92 | 0.461 |
| Rv3684ko | -2.266 | -0.449 |
| delta_otsA_trehalose | 1.22 | 1.436 |