Top 10 genes with highest correlation to Rv0258c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2238c/ahpE | (cc=0.5844) | info on Rv2238c/ahpE |
| Rv1736c/narX | (cc=0.5499) | info on Rv1736c/narX |
| Rv3226c/- | (cc=0.5259) | info on Rv3226c/- |
| Rv0080/- | (cc=0.5117) | info on Rv0080/- |
| Rv3294c/- | (cc=0.4912) | info on Rv3294c/- |
| Rv2636/- | (cc=0.4869) | info on Rv2636/- |
| Rv2687c/- | (cc=0.4866) | info on Rv2687c/- |
| Rv1940/ribA1 | (cc=0.4759) | info on Rv1940/ribA1 |
| Rv1843c/guaB1 | (cc=0.4729) | info on Rv1843c/guaB1 |
| Rv1882c/- | (cc=0.4701) | info on Rv1882c/- |
Correlation of Rv0258c/- with Rv2238c/ahpE
Normalized LFCs for Rv0258c/-:
(description and provenance of datasets)
| Rv0258c/- | Rv2238c/ahpE | |
| Fe_supp_jason_reseq | -1.036 | 2.038 |
| low_pH_jason_reseq | -0.515 | -1.432 |
| NO_jason_reseq | -1.189 | 1.04 |
| B6_jason_reseq | 0.119 | 2.593 |
| MHCII_jason_reseq | 0.693 | 0.036 |
| Isoniazid02 | 0.413 | 0.861 |
| Rifampicin4 | -0.173 | 0.761 |
| Ethambutol3 | -0.118 | 0.72 |
| Meropenem3 | 0.212 | -0.081 |
| Vancomycin16 | 1.016 | -0.78 |
| Rv2680_day32 | 0.66 | -0.459 |
| H37Rv_KO_MarP | 0.214 | 0.358 |
| hypoxia_3wks | 0.0 | -1.898 |
| hypoxia_6wks | -1.013 | -1.733 |
| glycerol | -0.664 | 0.312 |
| cholesterol | 0.362 | 0.605 |
| AJ | -0.286 | -0.983 |
| Bibs02 | -0.26 | -0.26 |
| Bibs02c | 0.0 | -2.739 |
| BL6 | -2.406 | -2.406 |
| BL6a | -0.281 | -1.913 |
| BXD01 | -2.047 | -2.376 |
| BXD010 | -2.336 | -2.463 |
| BXD011 | -2.002 | -0.987 |
| BXD03 | -2.601 | -2.467 |
| BXD04 | -2.256 | -2.143 |
| BXD05 | -2.116 | -1.762 |
| BXD06 | -1.912 | -2.567 |
| BXD07 | -1.174 | -1.523 |
| BXD08 | -2.091 | -1.821 |
| BXD09 | -2.435 | -2.209 |
| CAST | 0.452 | -0.757 |
| CCcont | -2.872 | -2.724 |
| DS01 | -0.57 | 0.039 |
| DS02 | 0.811 | 0.271 |
| DS04 | -1.573 | -0.389 |
| DS0c | 0.782 | 0.679 |
| GP01 | 0.109 | -1.629 |
| GP02 | -0.292 | -1.442 |
| GP0c | -1.862 | -2.145 |
| NOD | 0.28 | -0.542 |
| NZO | 0.649 | 0.364 |
| PWK | 0.095 | 0.244 |
| H37Rv_KO_CtpC | 0.447 | -0.169 |
| H37Rv_KO_CtpD | -1.393 | 0.177 |
| H37Rv_KO_Rv1272 | 0.091 | -1.619 |
| H37Rv_KO_SugABC | -1.557 | -1.297 |
| H37Rv_KO_MbtN | -1.039 | -0.207 |
| Trans05 | -0.113 | -1.566 |
| macrophage_unactivated | 0.0 | -0.83 |
| IL1 | -0.905 | -0.78 |
| Rapamycin | 0.402 | -0.807 |
| Tcell | -0.994 | -0.411 |
| GMCSF | -1.827 | -0.333 |
| IFNab | 0.203 | -0.381 |
| IFNg | -1.849 | -0.703 |
| IFNg_GMCSF1 | 2.69 | 2.951 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.218 | 0.0 |
| secA2_input | -2.055 | -3.478 |
| delta_Rv3594 | -0.332 | -1.576 |
| delta_Rv3717 | -0.427 | -1.198 |
| delta_Rv3811 | -0.845 | -2.492 |
| delta_Rv0954 | -0.044 | -1.206 |
| PonA1 | -2.125 | -1.309 |
| EccD1_KO | -1.519 | -0.204 |
| EspI_KO | -0.291 | -1.877 |
| PE35_KO | -1.765 | -2.208 |
| PPE68_KO | -1.062 | -2.208 |
| glycerol2 | -0.531 | 0.0 |
| lignocerate | -0.293 | 0.0 |
| oleate | -0.537 | 0.0 |
| phosphatidylcholine | -0.531 | 0.0 |
| acetate | 0.178 | 0.0 |
| glucAc | -0.392 | 0.0 |
| Rv0950ko | -1.004 | -0.425 |
| Rv1096ko | -0.92 | 0.911 |
| Rv3684ko | -2.266 | -1.11 |
| delta_otsA_trehalose | 1.22 | 1.131 |