Top 10 genes with highest correlation to Rv0249c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0248c/- | (cc=0.8936) | info on Rv0248c/- |
| Rv0247c/- | (cc=0.7398) | info on Rv0247c/- |
| Rv0296c/- | (cc=0.657) | info on Rv0296c/- |
| Rv0243/fadA2 | (cc=0.5701) | info on Rv0243/fadA2 |
| Rv1193/fadD36 | (cc=0.5665) | info on Rv1193/fadD36 |
| Rv3160c/- | (cc=0.5533) | info on Rv3160c/- |
| Rv3822/- | (cc=0.5408) | info on Rv3822/- |
| Rv2127/ansP1 | (cc=0.5227) | info on Rv2127/ansP1 |
| Rv2989/- | (cc=0.5167) | info on Rv2989/- |
| Rv2380c/mbtE | (cc=0.5124) | info on Rv2380c/mbtE |
Correlation of Rv0249c/- with Rv0247c/-
Normalized LFCs for Rv0249c/-:
(description and provenance of datasets)
| Rv0249c/- | Rv0247c/- | |
| Fe_supp_jason_reseq | 1.841 | 1.983 |
| low_pH_jason_reseq | -1.255 | -1.419 |
| NO_jason_reseq | -3.961 | -1.231 |
| B6_jason_reseq | -1.674 | -0.941 |
| MHCII_jason_reseq | -1.37 | -0.572 |
| Isoniazid02 | 2.206 | 1.883 |
| Rifampicin4 | -0.384 | 0.69 |
| Ethambutol3 | 0.435 | 0.804 |
| Meropenem3 | 1.688 | 2.189 |
| Vancomycin16 | 0.0 | 0.353 |
| Rv2680_day32 | -3.066 | -2.632 |
| H37Rv_KO_MarP | 0.714 | 0.0 |
| hypoxia_3wks | -2.157 | -1.36 |
| hypoxia_6wks | -2.714 | -1.934 |
| glycerol | -2.681 | -2.017 |
| cholesterol | -0.26 | 0.057 |
| AJ | -2.795 | -2.318 |
| Bibs02 | -2.203 | -1.827 |
| Bibs02c | -2.402 | -2.09 |
| BL6 | -1.932 | -1.125 |
| BL6a | -2.907 | -1.435 |
| BXD01 | -1.496 | -1.052 |
| BXD010 | -1.701 | 0.674 |
| BXD011 | -1.691 | -0.824 |
| BXD03 | -0.907 | 0.42 |
| BXD04 | 0.209 | -0.549 |
| BXD05 | -2.079 | -1.21 |
| BXD06 | -1.461 | -0.768 |
| BXD07 | -1.932 | -0.702 |
| BXD08 | -2.054 | -0.674 |
| BXD09 | -2.062 | -1.135 |
| CAST | -1.984 | -1.023 |
| CCcont | 1.082 | 2.237 |
| DS01 | 0.286 | -1.359 |
| DS02 | 0.402 | -0.714 |
| DS04 | 0.0 | -0.533 |
| DS0c | 0.434 | -1.403 |
| GP01 | -1.796 | -0.986 |
| GP02 | -1.513 | -0.831 |
| GP0c | -2.235 | -1.299 |
| NOD | -1.507 | 1.534 |
| NZO | -2.783 | 0.228 |
| PWK | -1.773 | -1.584 |
| H37Rv_KO_CtpC | 0.142 | 1.332 |
| H37Rv_KO_CtpD | -1.091 | -0.283 |
| H37Rv_KO_Rv1272 | -1.968 | -0.387 |
| H37Rv_KO_SugABC | -0.939 | -0.083 |
| H37Rv_KO_MbtN | -0.977 | -0.396 |
| Trans05 | -2.128 | -1.175 |
| macrophage_unactivated | 1.054 | 0.896 |
| IL1 | -0.819 | -1.05 |
| Rapamycin | -0.196 | -0.62 |
| Tcell | 2.483 | 0.753 |
| GMCSF | -0.935 | -1.151 |
| IFNab | -1.318 | -1.07 |
| IFNg | -1.914 | -1.165 |
| IFNg_GMCSF1 | -1.647 | -0.412 |
| Rv1432_day32 | -2.85 | -3.206 |
| Rv1565c_day32 | -1.229 | -0.415 |
| secA2_input | -0.546 | 0.282 |
| delta_Rv3594 | -0.428 | -0.788 |
| delta_Rv3717 | -1.891 | -1.664 |
| delta_Rv3811 | -0.576 | -0.391 |
| delta_Rv0954 | 1.292 | 1.441 |
| PonA1 | 1.846 | 1.182 |
| EccD1_KO | 0.395 | 0.697 |
| EspI_KO | 0.442 | 2.23 |
| PE35_KO | 0.035 | 1.683 |
| PPE68_KO | 0.422 | 1.789 |
| glycerol2 | 4.467 | 1.941 |
| lignocerate | 0.431 | -0.32 |
| oleate | 5.156 | 1.418 |
| phosphatidylcholine | 1.162 | -0.508 |
| acetate | -0.78 | -0.78 |
| glucAc | 0.366 | 0.3 |
| Rv0950ko | 0.308 | 0.314 |
| Rv1096ko | -0.881 | 0.063 |
| Rv3684ko | -0.701 | -0.072 |
| delta_otsA_trehalose | -2.062 | -1.786 |