Top 10 genes with highest correlation to Rv0248c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0249c/- | (cc=0.8936) | info on Rv0249c/- |
| Rv0247c/- | (cc=0.7475) | info on Rv0247c/- |
| Rv0243/fadA2 | (cc=0.6117) | info on Rv0243/fadA2 |
| Rv0634A/- | (cc=0.5921) | info on Rv0634A/- |
| Rv0296c/- | (cc=0.5647) | info on Rv0296c/- |
| Rv3160c/- | (cc=0.5492) | info on Rv3160c/- |
| Rv2379c/mbtF | (cc=0.5345) | info on Rv2379c/mbtF |
| Rv1287/- | (cc=0.524) | info on Rv1287/- |
| Rv1206/fadD6 | (cc=0.5165) | info on Rv1206/fadD6 |
| Rv2380c/mbtE | (cc=0.5029) | info on Rv2380c/mbtE |
Correlation of Rv0248c/- with Rv2379c/mbtF
Normalized LFCs for Rv0248c/-:
(description and provenance of datasets)
| Rv0248c/- | Rv2379c/mbtF | |
| Fe_supp_jason_reseq | 2.208 | 0.827 |
| low_pH_jason_reseq | -0.355 | 0.415 |
| NO_jason_reseq | -2.294 | -1.089 |
| B6_jason_reseq | -0.97 | -0.752 |
| MHCII_jason_reseq | -0.977 | -0.663 |
| Isoniazid02 | 1.007 | 0.16 |
| Rifampicin4 | -0.653 | -0.103 |
| Ethambutol3 | -0.403 | -0.095 |
| Meropenem3 | 3.554 | 1.031 |
| Vancomycin16 | -1.409 | 0.196 |
| Rv2680_day32 | -2.482 | -1.381 |
| H37Rv_KO_MarP | 0.447 | 1.346 |
| hypoxia_3wks | -1.806 | -2.157 |
| hypoxia_6wks | -2.591 | -1.416 |
| glycerol | -1.745 | 0.114 |
| cholesterol | -0.354 | 0.233 |
| AJ | -2.247 | -0.138 |
| Bibs02 | -2.099 | -0.621 |
| Bibs02c | -2.026 | -0.887 |
| BL6 | -1.812 | -0.768 |
| BL6a | -1.918 | -0.839 |
| BXD01 | -1.678 | -0.552 |
| BXD010 | -1.557 | -0.787 |
| BXD011 | -1.463 | -0.243 |
| BXD03 | -0.664 | -0.831 |
| BXD04 | -0.409 | -0.636 |
| BXD05 | -2.073 | -0.692 |
| BXD06 | -1.533 | -0.454 |
| BXD07 | -1.783 | -0.712 |
| BXD08 | -1.288 | -0.817 |
| BXD09 | -1.919 | -0.723 |
| CAST | -1.668 | 0.37 |
| CCcont | 1.049 | -0.089 |
| DS01 | 0.245 | 2.572 |
| DS02 | 0.0 | 1.698 |
| DS04 | 0.453 | 0.967 |
| DS0c | 0.267 | 0.349 |
| GP01 | -1.619 | -0.607 |
| GP02 | -1.364 | -0.511 |
| GP0c | -2.002 | -0.799 |
| NOD | -0.612 | 0.0 |
| NZO | -2.724 | 0.321 |
| PWK | -1.9 | -0.374 |
| H37Rv_KO_CtpC | 0.488 | -0.2 |
| H37Rv_KO_CtpD | -0.863 | -0.333 |
| H37Rv_KO_Rv1272 | -1.446 | -0.371 |
| H37Rv_KO_SugABC | -1.137 | -0.42 |
| H37Rv_KO_MbtN | -0.841 | -0.53 |
| Trans05 | -2.012 | -0.803 |
| macrophage_unactivated | 1.594 | 0.761 |
| IL1 | -2.572 | 0.0 |
| Rapamycin | -2.661 | -0.424 |
| Tcell | 4.027 | 1.456 |
| GMCSF | -2.289 | 0.0 |
| IFNab | -2.621 | -0.417 |
| IFNg | -2.798 | 0.0 |
| IFNg_GMCSF1 | -2.724 | 0.396 |
| Rv1432_day32 | -3.215 | -0.323 |
| Rv1565c_day32 | -0.873 | 0.0 |
| secA2_input | -0.05 | 0.723 |
| delta_Rv3594 | -0.805 | -0.82 |
| delta_Rv3717 | -2.152 | -0.866 |
| delta_Rv3811 | -1.157 | -0.907 |
| delta_Rv0954 | 1.579 | -0.204 |
| PonA1 | 1.2 | 1.211 |
| EccD1_KO | 0.421 | 1.131 |
| EspI_KO | 1.012 | 1.104 |
| PE35_KO | 0.464 | 1.916 |
| PPE68_KO | 0.787 | 1.75 |
| glycerol2 | 3.602 | -0.347 |
| lignocerate | 0.1 | -0.302 |
| oleate | 3.963 | -0.227 |
| phosphatidylcholine | 0.611 | 0.104 |
| acetate | 0.266 | 0.459 |
| glucAc | 0.242 | -0.256 |
| Rv0950ko | 0.6 | 0.311 |
| Rv1096ko | -0.109 | 0.458 |
| Rv3684ko | 0.059 | 1.359 |
| delta_otsA_trehalose | -0.737 | 0.481 |