Top 10 genes with highest correlation to Rv0240/vapC24:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3719/- | (cc=0.5867) | info on Rv3719/- |
| Rv3567c/hsaB | (cc=0.5306) | info on Rv3567c/hsaB |
| Rv0055/rpsR1 | (cc=0.4946) | info on Rv0055/rpsR1 |
| Rv3528c/- | (cc=0.4774) | info on Rv3528c/- |
| Rv3816c/- | (cc=0.4713) | info on Rv3816c/- |
| Rv2481c/- | (cc=0.4684) | info on Rv2481c/- |
| Rv0188/- | (cc=0.4641) | info on Rv0188/- |
| Rv3875/esxA | (cc=0.4639) | info on Rv3875/esxA |
| Rv1116/- | (cc=0.443) | info on Rv1116/- |
| Rv1765A/- | (cc=0.4424) | info on Rv1765A/- |
Correlation of Rv0240/vapC24 with Rv3719/-
Normalized LFCs for Rv0240/vapC24:
(description and provenance of datasets)
| Rv0240/vapC24 | Rv3719/- | |
| Fe_supp_jason_reseq | 1.394 | 0.281 |
| low_pH_jason_reseq | 0.122 | -1.031 |
| NO_jason_reseq | 1.026 | 2.714 |
| B6_jason_reseq | 0.75 | 0.779 |
| MHCII_jason_reseq | 0.792 | -0.513 |
| Isoniazid02 | 0.343 | 0.111 |
| Rifampicin4 | -0.363 | -2.97 |
| Ethambutol3 | -0.072 | 0.66 |
| Meropenem3 | -0.145 | -0.22 |
| Vancomycin16 | -0.032 | -1.045 |
| Rv2680_day32 | -0.912 | -0.239 |
| H37Rv_KO_MarP | 0.642 | -1.218 |
| hypoxia_3wks | -1.559 | -4.685 |
| hypoxia_6wks | -0.946 | -2.76 |
| glycerol | -0.275 | -1.596 |
| cholesterol | -1.118 | -0.598 |
| AJ | -0.508 | -0.923 |
| Bibs02 | 0.201 | 0.221 |
| Bibs02c | 0.23 | 0.13 |
| BL6 | 1.583 | 0.4 |
| BL6a | 0.808 | 1.538 |
| BXD01 | 1.06 | 1.149 |
| BXD010 | 1.867 | 1.367 |
| BXD011 | 0.766 | 2.597 |
| BXD03 | 1.701 | 0.935 |
| BXD04 | 0.643 | 1.859 |
| BXD05 | 0.764 | 1.535 |
| BXD06 | 1.214 | 1.736 |
| BXD07 | 1.22 | 1.765 |
| BXD08 | 1.268 | 1.498 |
| BXD09 | 0.584 | 1.531 |
| CAST | -0.47 | -0.879 |
| CCcont | 1.582 | 1.196 |
| DS01 | -0.482 | -0.471 |
| DS02 | 0.194 | 0.323 |
| DS04 | -0.822 | -0.569 |
| DS0c | -0.413 | -0.762 |
| GP01 | 0.28 | 1.224 |
| GP02 | 0.456 | 0.272 |
| GP0c | 0.848 | 1.206 |
| NOD | -0.397 | -0.789 |
| NZO | -1.143 | -0.824 |
| PWK | 0.607 | 0.398 |
| H37Rv_KO_CtpC | 0.357 | 0.052 |
| H37Rv_KO_CtpD | -0.224 | -0.252 |
| H37Rv_KO_Rv1272 | 0.255 | -0.015 |
| H37Rv_KO_SugABC | -1.855 | 0.301 |
| H37Rv_KO_MbtN | -0.334 | 0.321 |
| Trans05 | -0.466 | 0.974 |
| macrophage_unactivated | -0.126 | -0.357 |
| IL1 | -0.32 | 0.549 |
| Rapamycin | -0.574 | 0.675 |
| Tcell | -0.267 | -0.13 |
| GMCSF | -0.422 | -0.269 |
| IFNab | 0.166 | -0.245 |
| IFNg | -0.623 | -2.32 |
| IFNg_GMCSF1 | -0.911 | -1.2 |
| Rv1432_day32 | 0.252 | -1.248 |
| Rv1565c_day32 | -1.254 | -2.203 |
| secA2_input | 0.373 | 0.542 |
| delta_Rv3594 | -0.277 | -0.566 |
| delta_Rv3717 | -0.469 | 0.121 |
| delta_Rv3811 | 0.225 | -0.604 |
| delta_Rv0954 | 0.36 | -0.516 |
| PonA1 | -0.209 | -0.944 |
| EccD1_KO | 0.691 | -0.799 |
| EspI_KO | 0.411 | -0.761 |
| PE35_KO | -0.356 | -0.16 |
| PPE68_KO | 0.157 | -0.65 |
| glycerol2 | 0.78 | -0.083 |
| lignocerate | 1.14 | -0.307 |
| oleate | -0.722 | -1.337 |
| phosphatidylcholine | 0.78 | -0.779 |
| acetate | 0.514 | -0.199 |
| glucAc | 0.605 | 0.0 |
| Rv0950ko | 0.905 | 0.914 |
| Rv1096ko | 0.847 | 0.54 |
| Rv3684ko | 0.0 | 1.533 |
| delta_otsA_trehalose | -0.568 | 1.228 |