Top 10 genes with highest correlation to Rv0238/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2131c/cysQ | (cc=0.7516) | info on Rv2131c/cysQ |
Rv1339/- | (cc=0.6938) | info on Rv1339/- |
Rv1780/- | (cc=0.6695) | info on Rv1780/- |
Rv0211/pckA | (cc=0.6603) | info on Rv0211/pckA |
Rv1078/pra | (cc=0.6601) | info on Rv1078/pra |
Rv1080c/greA | (cc=0.6578) | info on Rv1080c/greA |
Rv0642c/mmaA4 | (cc=0.6272) | info on Rv0642c/mmaA4 |
Rv1543/- | (cc=0.602) | info on Rv1543/- |
Rv0502/- | (cc=0.5871) | info on Rv0502/- |
Rv2785c/rpsO | (cc=0.5816) | info on Rv2785c/rpsO |
Correlation of Rv0238/- with Rv2131c/cysQ
Normalized LFCs for Rv0238/-:
(description and provenance of datasets)
Rv0238/- | Rv2131c/cysQ | |
Fe_supp_jason_reseq | -0.583 | -1.579 |
low_pH_jason_reseq | -1.919 | 2.441 |
NO_jason_reseq | -2.058 | -2.042 |
B6_jason_reseq | -1.519 | -1.402 |
MHCII_jason_reseq | -1.595 | -0.977 |
Isoniazid02 | -0.796 | 4.744 |
Rifampicin4 | -0.211 | 0.29 |
Ethambutol3 | 1.17 | 0.777 |
Meropenem3 | 1.411 | -0.497 |
Vancomycin16 | 0.562 | -1.303 |
Rv2680_day32 | 0.131 | 0.0 |
H37Rv_KO_MarP | 1.25 | 1.3 |
hypoxia_3wks | 2.125 | 1.184 |
hypoxia_6wks | 1.831 | 2.414 |
glycerol | 1.549 | 0.0 |
cholesterol | 1.17 | 0.0 |
AJ | -0.442 | 0.0 |
Bibs02 | -0.348 | 0.0 |
Bibs02c | -0.191 | 0.0 |
BL6 | -0.238 | 2.634 |
BL6a | 0.595 | 2.709 |
BXD01 | 0.0 | 3.093 |
BXD010 | 1.769 | 2.525 |
BXD011 | 2.186 | 2.032 |
BXD03 | 0.0 | 0.75 |
BXD04 | 0.594 | 1.582 |
BXD05 | 1.827 | 2.051 |
BXD06 | 0.401 | 2.793 |
BXD07 | 0.115 | 3.258 |
BXD08 | 0.111 | 1.781 |
BXD09 | 2.036 | 3.789 |
CAST | -0.21 | 0.0 |
CCcont | 3.213 | 4.141 |
DS01 | -0.45 | 0.0 |
DS02 | -0.414 | 0.0 |
DS04 | 1.989 | 2.358 |
DS0c | -0.413 | 0.0 |
GP01 | -0.188 | 0.0 |
GP02 | -0.159 | 0.159 |
GP0c | -0.248 | 0.0 |
NOD | 0.0 | 0.0 |
NZO | -0.38 | 0.0 |
PWK | -0.374 | 0.0 |
H37Rv_KO_CtpC | 0.0 | 0.901 |
H37Rv_KO_CtpD | -0.116 | 0.241 |
H37Rv_KO_Rv1272 | -0.129 | 1.714 |
H37Rv_KO_SugABC | 1.165 | 2.572 |
H37Rv_KO_MbtN | 3.167 | 1.712 |
Trans05 | 0.305 | 1.251 |
macrophage_unactivated | -1.016 | -1.146 |
IL1 | -0.955 | -2.515 |
Rapamycin | 0.068 | -1.439 |
Tcell | -1.235 | -3.812 |
GMCSF | -3.958 | -1.545 |
IFNab | 0.738 | 2.576 |
IFNg | -3.247 | -2.673 |
IFNg_GMCSF1 | -4.71 | -1.838 |
Rv1432_day32 | 0.18 | 0.0 |
Rv1565c_day32 | 0.0 | 0.0 |
secA2_input | -1.565 | 0.523 |
delta_Rv3594 | 3.099 | 4.569 |
delta_Rv3717 | 3.619 | 3.925 |
delta_Rv3811 | 3.289 | 4.714 |
delta_Rv0954 | -2.003 | -0.69 |
PonA1 | -2.35 | -1.32 |
EccD1_KO | -6.0 | -5.903 |
EspI_KO | -6.0 | -6.0 |
PE35_KO | -3.856 | -3.063 |
PPE68_KO | -3.663 | -4.348 |
glycerol2 | -3.747 | -0.744 |
lignocerate | -1.501 | -1.218 |
oleate | 4.347 | -1.955 |
phosphatidylcholine | -3.947 | -1.931 |
acetate | -0.54 | 0.422 |
glucAc | -0.215 | -0.249 |
Rv0950ko | -6.0 | -5.992 |
Rv1096ko | -5.54 | -6.0 |
Rv3684ko | -2.911 | -6.0 |
delta_otsA_trehalose | 1.902 | -1.39 |