Top 10 genes with highest correlation to Rv0231/fadE4:
update plot | correlation | link to info on gene |
---|---|---|
Rv1500/- | (cc=0.6561) | info on Rv1500/- |
Rv3397c/phyA | (cc=0.6367) | info on Rv3397c/phyA |
Rv1373/- | (cc=0.6293) | info on Rv1373/- |
Rv0413/mutT3 | (cc=0.6135) | info on Rv0413/mutT3 |
Rv1050/- | (cc=0.5782) | info on Rv1050/- |
Rv2390c/- | (cc=0.5777) | info on Rv2390c/- |
Rv0397A/- | (cc=0.5773) | info on Rv0397A/- |
Rv3840/- | (cc=0.5647) | info on Rv3840/- |
Rv3524/- | (cc=0.562) | info on Rv3524/- |
Rv1753c/PPE24 | (cc=0.5603) | info on Rv1753c/PPE24 |
Correlation of Rv0231/fadE4 with Rv3840/-
Normalized LFCs for Rv0231/fadE4:
(description and provenance of datasets)
Rv0231/fadE4 | Rv3840/- | |
Fe_supp_jason_reseq | -0.27 | -0.158 |
low_pH_jason_reseq | -0.589 | -1.121 |
NO_jason_reseq | 0.055 | 0.129 |
B6_jason_reseq | -0.164 | -0.108 |
MHCII_jason_reseq | 0.242 | -0.192 |
Isoniazid02 | -1.326 | -0.764 |
Rifampicin4 | -1.993 | -0.374 |
Ethambutol3 | -1.448 | -0.652 |
Meropenem3 | -0.779 | 0.43 |
Vancomycin16 | -1.353 | -0.584 |
Rv2680_day32 | 0.253 | 0.162 |
H37Rv_KO_MarP | -0.268 | 0.182 |
hypoxia_3wks | 0.235 | 0.191 |
hypoxia_6wks | 0.0 | 0.311 |
glycerol | -0.813 | -0.032 |
cholesterol | -0.205 | 0.119 |
AJ | 0.249 | 0.21 |
Bibs02 | 0.265 | 0.123 |
Bibs02c | -0.091 | -0.69 |
BL6 | 0.279 | 0.27 |
BL6a | 0.076 | -0.059 |
BXD01 | 0.244 | 0.375 |
BXD010 | 0.514 | 0.567 |
BXD011 | 0.682 | 0.188 |
BXD03 | 0.517 | 0.728 |
BXD04 | 0.876 | 0.453 |
BXD05 | 0.437 | 0.83 |
BXD06 | 0.504 | 0.55 |
BXD07 | 0.504 | 0.367 |
BXD08 | 0.613 | 0.353 |
BXD09 | 0.403 | 0.68 |
CAST | 0.484 | 0.402 |
CCcont | 0.057 | -0.058 |
DS01 | 0.046 | 0.05 |
DS02 | 0.154 | 0.537 |
DS04 | 0.082 | 0.233 |
DS0c | 0.074 | 0.167 |
GP01 | 0.696 | 0.636 |
GP02 | 0.201 | 1.625 |
GP0c | 0.092 | 0.811 |
NOD | 0.556 | 0.439 |
NZO | 0.127 | -0.095 |
PWK | 0.23 | 0.323 |
H37Rv_KO_CtpC | 0.157 | 0.238 |
H37Rv_KO_CtpD | 0.205 | 0.113 |
H37Rv_KO_Rv1272 | 0.607 | 0.542 |
H37Rv_KO_SugABC | 0.15 | 0.935 |
H37Rv_KO_MbtN | 0.361 | 0.526 |
Trans05 | -0.062 | -0.102 |
macrophage_unactivated | -0.044 | -0.076 |
IL1 | 0.3 | -0.208 |
Rapamycin | 0.242 | 0.47 |
Tcell | 0.091 | 0.166 |
GMCSF | 0.037 | 0.111 |
IFNab | -0.281 | 0.49 |
IFNg | 0.198 | 0.2 |
IFNg_GMCSF1 | 0.902 | 0.101 |
Rv1432_day32 | 0.189 | 0.349 |
Rv1565c_day32 | -0.077 | 0.039 |
secA2_input | -0.326 | 0.377 |
delta_Rv3594 | 0.024 | -0.415 |
delta_Rv3717 | -0.317 | 0.074 |
delta_Rv3811 | -0.693 | -0.164 |
delta_Rv0954 | 0.081 | -0.225 |
PonA1 | 0.031 | -0.421 |
EccD1_KO | -0.181 | -0.431 |
EspI_KO | -0.274 | -0.191 |
PE35_KO | -0.613 | -0.537 |
PPE68_KO | -0.323 | -0.576 |
glycerol2 | -0.126 | 0.314 |
lignocerate | -0.104 | -0.073 |
oleate | 0.113 | 0.625 |
phosphatidylcholine | -0.007 | 0.108 |
acetate | -0.567 | -0.487 |
glucAc | -0.394 | -0.564 |
Rv0950ko | 0.528 | 0.697 |
Rv1096ko | 0.528 | 0.0 |
Rv3684ko | -0.02 | 0.049 |
delta_otsA_trehalose | 0.0 | -1.073 |