Top 10 genes with highest correlation to Rv0226c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0278c/PE_PGRS3 | (cc=0.5644) | info on Rv0278c/PE_PGRS3 |
| Rv1676/- | (cc=0.5603) | info on Rv1676/- |
| Rv1087/PE_PGRS21 | (cc=0.5476) | info on Rv1087/PE_PGRS21 |
| Rv2802c/- | (cc=0.5458) | info on Rv2802c/- |
| Rv2821c/- | (cc=0.5377) | info on Rv2821c/- |
| Rv0649/fabD2 | (cc=0.5245) | info on Rv0649/fabD2 |
| Rv2402/- | (cc=0.5092) | info on Rv2402/- |
| Rv1718/- | (cc=0.5072) | info on Rv1718/- |
| Rv2638/- | (cc=0.5052) | info on Rv2638/- |
| Rv3705A/- | (cc=0.5046) | info on Rv3705A/- |
Correlation of Rv0226c/- with Rv0278c/PE_PGRS3
Normalized LFCs for Rv0226c/-:
(description and provenance of datasets)
| Rv0226c/- | Rv0278c/PE_PGRS3 | |
| Fe_supp_jason_reseq | 0.0 | -0.425 |
| low_pH_jason_reseq | -1.103 | -0.853 |
| NO_jason_reseq | -0.541 | -0.249 |
| B6_jason_reseq | -0.111 | -0.18 |
| MHCII_jason_reseq | 0.296 | 0.931 |
| Isoniazid02 | 0.383 | -0.119 |
| Rifampicin4 | 0.712 | 0.412 |
| Ethambutol3 | 0.085 | 0.711 |
| Meropenem3 | 0.581 | 1.444 |
| Vancomycin16 | 0.536 | 0.0 |
| Rv2680_day32 | -0.789 | 0.83 |
| H37Rv_KO_MarP | -0.299 | 0.416 |
| hypoxia_3wks | -0.885 | -0.427 |
| hypoxia_6wks | -0.637 | -0.223 |
| glycerol | 1.379 | 1.118 |
| cholesterol | 0.614 | 1.118 |
| AJ | -0.405 | 0.341 |
| Bibs02 | -0.234 | 1.095 |
| Bibs02c | 0.587 | 0.041 |
| BL6 | 0.097 | -0.701 |
| BL6a | 0.555 | -1.045 |
| BXD01 | -0.358 | -0.192 |
| BXD010 | 0.236 | -0.594 |
| BXD011 | -0.418 | -0.553 |
| BXD03 | -0.686 | -0.902 |
| BXD04 | 0.384 | -1.024 |
| BXD05 | 0.0 | -0.544 |
| BXD06 | -0.438 | -1.105 |
| BXD07 | -0.454 | -0.269 |
| BXD08 | -0.963 | -0.197 |
| BXD09 | -0.713 | -0.342 |
| CAST | -0.402 | -0.045 |
| CCcont | 0.372 | -0.122 |
| DS01 | -0.098 | -0.144 |
| DS02 | 0.61 | 0.759 |
| DS04 | 0.973 | 0.382 |
| DS0c | 0.8 | -0.178 |
| GP01 | 0.654 | 0.852 |
| GP02 | 0.727 | 0.732 |
| GP0c | 1.091 | 0.169 |
| NOD | -0.737 | -0.602 |
| NZO | 0.79 | -0.039 |
| PWK | -0.081 | 0.185 |
| H37Rv_KO_CtpC | 0.599 | -0.705 |
| H37Rv_KO_CtpD | -0.348 | -0.077 |
| H37Rv_KO_Rv1272 | -0.181 | 0.081 |
| H37Rv_KO_SugABC | 0.446 | 0.146 |
| H37Rv_KO_MbtN | -0.832 | -0.578 |
| Trans05 | -0.109 | 0.723 |
| macrophage_unactivated | 0.0 | -0.211 |
| IL1 | -0.199 | -1.783 |
| Rapamycin | -1.409 | -1.013 |
| Tcell | -0.691 | -1.075 |
| GMCSF | -0.982 | -0.982 |
| IFNab | -1.672 | -0.998 |
| IFNg | -1.743 | -0.882 |
| IFNg_GMCSF1 | -1.738 | -0.211 |
| Rv1432_day32 | 0.0 | 0.24 |
| Rv1565c_day32 | -0.52 | -0.622 |
| secA2_input | -0.611 | -0.028 |
| delta_Rv3594 | -0.961 | 0.02 |
| delta_Rv3717 | -0.228 | 0.156 |
| delta_Rv3811 | 0.238 | -0.498 |
| delta_Rv0954 | -0.729 | -0.634 |
| PonA1 | -0.154 | 0.479 |
| EccD1_KO | 0.306 | 0.095 |
| EspI_KO | -0.918 | 0.442 |
| PE35_KO | 1.105 | 0.213 |
| PPE68_KO | 0.841 | 0.234 |
| glycerol2 | 0.618 | 2.123 |
| lignocerate | 1.453 | 2.776 |
| oleate | -0.493 | 0.0 |
| phosphatidylcholine | 0.913 | 2.122 |
| acetate | 1.084 | 3.238 |
| glucAc | 1.186 | 2.725 |
| Rv0950ko | -0.6 | 0.0 |
| Rv1096ko | 0.139 | 0.247 |
| Rv3684ko | -0.154 | -0.111 |
| delta_otsA_trehalose | 0.0 | -1.199 |