Top 10 genes with highest correlation to Rv0206c/mmpL3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0431/- | (cc=0.5592) | info on Rv0431/- |
| Rv3789/- | (cc=0.5076) | info on Rv3789/- |
| Rv2197c/- | (cc=0.4791) | info on Rv2197c/- |
| Rv0020c/fhaA | (cc=0.4677) | info on Rv0020c/fhaA |
| Rv3670/ephE | (cc=0.4598) | info on Rv3670/ephE |
| Rv2198c/mmpS3 | (cc=0.4521) | info on Rv2198c/mmpS3 |
| Rv0425c/ctpH | (cc=0.4518) | info on Rv0425c/ctpH |
| Rv1411c/lprG | (cc=0.4469) | info on Rv1411c/lprG |
| Rv0645c/mmaA1 | (cc=0.4452) | info on Rv0645c/mmaA1 |
| Rv3753c/- | (cc=0.445) | info on Rv3753c/- |
Correlation of Rv0206c/mmpL3 with Rv0431/-
Normalized LFCs for Rv0206c/mmpL3:
(description and provenance of datasets)
| Rv0206c/mmpL3 | Rv0431/- | |
| Fe_supp_jason_reseq | 0.0 | 0.751 |
| low_pH_jason_reseq | 0.0 | 1.305 |
| NO_jason_reseq | 0.0 | -0.436 |
| B6_jason_reseq | 0.0 | 0.695 |
| MHCII_jason_reseq | 0.135 | 0.0 |
| Isoniazid02 | -0.167 | -2.043 |
| Rifampicin4 | -0.653 | -4.04 |
| Ethambutol3 | -0.293 | -0.832 |
| Meropenem3 | -0.454 | -2.146 |
| Vancomycin16 | -1.005 | -2.918 |
| Rv2680_day32 | 3.519 | 2.141 |
| H37Rv_KO_MarP | -1.782 | -3.466 |
| hypoxia_3wks | 0.0 | -0.439 |
| hypoxia_6wks | 0.0 | -0.075 |
| glycerol | 0.0 | -1.583 |
| cholesterol | -0.145 | 0.082 |
| AJ | -0.232 | -1.193 |
| Bibs02 | -0.183 | 1.477 |
| Bibs02c | -0.209 | 1.117 |
| BL6 | -0.125 | 1.154 |
| BL6a | -0.198 | 1.092 |
| BXD01 | -0.13 | 1.07 |
| BXD010 | -0.128 | 0.328 |
| BXD011 | -0.127 | 0.236 |
| BXD03 | -0.135 | -1.06 |
| BXD04 | -0.124 | 0.878 |
| BXD05 | -0.135 | 0.405 |
| BXD06 | -0.133 | 0.372 |
| BXD07 | -0.138 | 0.533 |
| BXD08 | -0.133 | 1.697 |
| BXD09 | -0.14 | 0.976 |
| CAST | -0.23 | -0.521 |
| CCcont | 0.0 | 2.676 |
| DS01 | -0.236 | 0.38 |
| DS02 | -0.217 | 0.403 |
| DS04 | -0.194 | 2.112 |
| DS0c | 0.0 | 1.724 |
| GP01 | 0.249 | -0.903 |
| GP02 | 0.981 | 0.603 |
| GP0c | -0.13 | -0.342 |
| NOD | -0.225 | -0.952 |
| NZO | -0.199 | -1.124 |
| PWK | -0.196 | -1.009 |
| H37Rv_KO_CtpC | 0.148 | 2.33 |
| H37Rv_KO_CtpD | -0.127 | -0.778 |
| H37Rv_KO_Rv1272 | -0.141 | -1.105 |
| H37Rv_KO_SugABC | 0.388 | 0.972 |
| H37Rv_KO_MbtN | -0.103 | 4.38 |
| Trans05 | -0.131 | -0.295 |
| macrophage_unactivated | 0.0 | 0.761 |
| IL1 | -0.409 | -0.742 |
| Rapamycin | -0.424 | -0.101 |
| Tcell | -0.45 | 1.378 |
| GMCSF | -0.364 | 2.081 |
| IFNab | -0.417 | -0.203 |
| IFNg | -0.369 | -0.567 |
| IFNg_GMCSF1 | 0.0 | -0.104 |
| Rv1432_day32 | 0.0 | 0.488 |
| Rv1565c_day32 | 1.21 | 0.55 |
| secA2_input | -0.534 | -2.829 |
| delta_Rv3594 | -0.197 | 0.84 |
| delta_Rv3717 | 0.535 | 1.47 |
| delta_Rv3811 | 0.391 | -0.086 |
| delta_Rv0954 | -1.239 | -1.55 |
| PonA1 | -0.773 | -0.608 |
| EccD1_KO | -1.694 | -2.611 |
| EspI_KO | -1.469 | -3.268 |
| PE35_KO | -1.502 | -1.978 |
| PPE68_KO | -1.03 | -1.635 |
| glycerol2 | 0.0 | 1.513 |
| lignocerate | 0.0 | 2.66 |
| oleate | 0.0 | -0.248 |
| phosphatidylcholine | 0.0 | 2.507 |
| acetate | 0.0 | 1.127 |
| glucAc | 0.0 | 1.49 |
| Rv0950ko | -0.582 | -3.401 |
| Rv1096ko | -1.252 | -3.402 |
| Rv3684ko | 1.716 | 2.021 |
| delta_otsA_trehalose | -0.214 | 0.081 |