Top 10 genes with highest correlation to Rv0201c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1960c/parD1 | (cc=0.5285) | info on Rv1960c/parD1 |
| Rv1966/mce3A | (cc=0.4576) | info on Rv1966/mce3A |
| Rv1735c/- | (cc=0.444) | info on Rv1735c/- |
| Rv0984/moaB2 | (cc=0.4423) | info on Rv0984/moaB2 |
| Rv2713/sthA | (cc=0.4394) | info on Rv2713/sthA |
| Rv1872c/lldD2 | (cc=0.431) | info on Rv1872c/lldD2 |
| Rv1676/- | (cc=0.4303) | info on Rv1676/- |
| Rv1833c/- | (cc=0.4188) | info on Rv1833c/- |
| Rv3121/cyp141 | (cc=0.414) | info on Rv3121/cyp141 |
| Rv2841c/nusA | (cc=0.4125) | info on Rv2841c/nusA |
Correlation of Rv0201c/- with Rv2713/sthA
Normalized LFCs for Rv0201c/-:
(description and provenance of datasets)
| Rv0201c/- | Rv2713/sthA | |
| Fe_supp_jason_reseq | -1.326 | -0.47 |
| low_pH_jason_reseq | -0.671 | -0.134 |
| NO_jason_reseq | 0.662 | 0.84 |
| B6_jason_reseq | -2.845 | 0.389 |
| MHCII_jason_reseq | -2.333 | 0.151 |
| Isoniazid02 | -0.439 | 0.221 |
| Rifampicin4 | -2.069 | 0.171 |
| Ethambutol3 | 0.185 | 1.381 |
| Meropenem3 | -0.338 | 1.054 |
| Vancomycin16 | 0.085 | 0.061 |
| Rv2680_day32 | -0.475 | 0.335 |
| H37Rv_KO_MarP | -0.2 | 0.538 |
| hypoxia_3wks | -0.626 | -0.056 |
| hypoxia_6wks | -0.09 | -0.232 |
| glycerol | -1.659 | -0.724 |
| cholesterol | -0.956 | -0.303 |
| AJ | -1.365 | 0.232 |
| Bibs02 | -0.151 | 0.0 |
| Bibs02c | -0.714 | -0.438 |
| BL6 | -0.572 | 0.15 |
| BL6a | -1.515 | 0.026 |
| BXD01 | -0.893 | 0.071 |
| BXD010 | -0.484 | 0.518 |
| BXD011 | -1.429 | 0.115 |
| BXD03 | -1.233 | -0.332 |
| BXD04 | -1.652 | -0.335 |
| BXD05 | 0.427 | -0.153 |
| BXD06 | -0.849 | 0.191 |
| BXD07 | -1.501 | 0.117 |
| BXD08 | -1.492 | 0.055 |
| BXD09 | -1.154 | 0.328 |
| CAST | -0.325 | 0.672 |
| CCcont | -0.257 | -0.121 |
| DS01 | -0.893 | -0.2 |
| DS02 | -0.34 | -0.328 |
| DS04 | -2.253 | -0.526 |
| DS0c | -1.486 | 0.035 |
| GP01 | 0.735 | 0.79 |
| GP02 | 0.319 | 0.295 |
| GP0c | -0.649 | 0.829 |
| NOD | 2.06 | 0.831 |
| NZO | -0.717 | -0.094 |
| PWK | -0.497 | 0.253 |
| H37Rv_KO_CtpC | -0.918 | -0.51 |
| H37Rv_KO_CtpD | -1.282 | -0.017 |
| H37Rv_KO_Rv1272 | 0.935 | 0.299 |
| H37Rv_KO_SugABC | -1.868 | -0.36 |
| H37Rv_KO_MbtN | 0.327 | -0.171 |
| Trans05 | 0.582 | 0.345 |
| macrophage_unactivated | -1.935 | -0.458 |
| IL1 | -1.344 | -1.124 |
| Rapamycin | -2.437 | -0.629 |
| Tcell | -2.799 | -0.925 |
| GMCSF | -2.096 | -0.304 |
| IFNab | -1.684 | -0.263 |
| IFNg | -1.793 | -0.425 |
| IFNg_GMCSF1 | -3.381 | 0.245 |
| Rv1432_day32 | 0.04 | -0.535 |
| Rv1565c_day32 | 0.245 | 0.63 |
| secA2_input | -0.218 | 0.008 |
| delta_Rv3594 | -0.138 | 0.512 |
| delta_Rv3717 | -0.193 | 0.551 |
| delta_Rv3811 | -0.196 | 0.491 |
| delta_Rv0954 | -0.532 | 0.415 |
| PonA1 | 0.324 | -0.257 |
| EccD1_KO | 0.799 | -0.201 |
| EspI_KO | 0.086 | 0.493 |
| PE35_KO | -0.639 | 0.26 |
| PPE68_KO | 0.285 | 0.0 |
| glycerol2 | -0.615 | 0.755 |
| lignocerate | -0.614 | 0.879 |
| oleate | 0.223 | 0.886 |
| phosphatidylcholine | -0.527 | 0.959 |
| acetate | -0.783 | 0.475 |
| glucAc | -0.454 | 0.238 |
| Rv0950ko | -1.339 | -0.332 |
| Rv1096ko | -1.125 | -0.425 |
| Rv3684ko | -0.105 | -0.016 |
| delta_otsA_trehalose | 0.088 | -0.245 |