Top 10 genes with highest correlation to Rv0177/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0169/mce1A | (cc=0.7593) | info on Rv0169/mce1A |
| Rv0168/yrbE1B | (cc=0.7528) | info on Rv0168/yrbE1B |
| Rv0171/mce1C | (cc=0.745) | info on Rv0171/mce1C |
| Rv0174/mce1F | (cc=0.7325) | info on Rv0174/mce1F |
| Rv0167/yrbE1A | (cc=0.7314) | info on Rv0167/yrbE1A |
| Rv0178/- | (cc=0.7092) | info on Rv0178/- |
| Rv0172/mce1D | (cc=0.7068) | info on Rv0172/mce1D |
| Rv0175/- | (cc=0.6971) | info on Rv0175/- |
| Rv0170/mce1B | (cc=0.6486) | info on Rv0170/mce1B |
| Rv0173/lprK | (cc=0.6336) | info on Rv0173/lprK |
Correlation of Rv0177/- with Rv0169/mce1A
Normalized LFCs for Rv0177/-:
(description and provenance of datasets)
| Rv0177/- | Rv0169/mce1A | |
| Fe_supp_jason_reseq | 1.246 | 0.674 |
| low_pH_jason_reseq | 0.308 | 0.581 |
| NO_jason_reseq | 2.625 | 2.46 |
| B6_jason_reseq | 1.323 | 0.209 |
| MHCII_jason_reseq | -1.067 | -0.879 |
| Isoniazid02 | -0.739 | -0.501 |
| Rifampicin4 | 1.47 | 1.451 |
| Ethambutol3 | -1.012 | 0.444 |
| Meropenem3 | 1.842 | 2.361 |
| Vancomycin16 | 1.65 | 1.825 |
| Rv2680_day32 | 2.782 | 0.351 |
| H37Rv_KO_MarP | 0.264 | 0.457 |
| hypoxia_3wks | 1.336 | 2.173 |
| hypoxia_6wks | 1.359 | 2.222 |
| glycerol | -0.263 | 0.388 |
| cholesterol | 0.556 | 1.052 |
| AJ | -0.345 | -0.168 |
| Bibs02 | -2.5 | -2.951 |
| Bibs02c | -2.448 | -2.284 |
| BL6 | -0.075 | 0.631 |
| BL6a | -2.451 | -1.444 |
| BXD01 | -0.944 | 0.805 |
| BXD010 | -1.216 | 0.846 |
| BXD011 | -0.304 | 0.412 |
| BXD03 | -1.084 | 0.827 |
| BXD04 | -1.845 | 0.592 |
| BXD05 | -0.865 | 0.512 |
| BXD06 | -1.583 | 0.075 |
| BXD07 | -0.903 | 0.797 |
| BXD08 | -1.113 | 0.301 |
| BXD09 | -1.176 | 0.734 |
| CAST | -1.121 | -0.766 |
| CCcont | -1.848 | -0.006 |
| DS01 | -2.404 | -2.392 |
| DS02 | -2.617 | -1.793 |
| DS04 | -0.756 | -0.783 |
| DS0c | -3.386 | -2.292 |
| GP01 | -1.43 | -1.538 |
| GP02 | -1.319 | -1.501 |
| GP0c | -1.399 | -0.702 |
| NOD | -1.272 | -0.163 |
| NZO | 1.81 | 1.186 |
| PWK | -1.485 | -1.319 |
| H37Rv_KO_CtpC | -1.586 | -0.468 |
| H37Rv_KO_CtpD | -1.567 | -0.573 |
| H37Rv_KO_Rv1272 | -0.687 | 0.587 |
| H37Rv_KO_SugABC | 0.629 | 1.394 |
| H37Rv_KO_MbtN | -0.281 | 0.256 |
| Trans05 | -0.294 | 0.501 |
| macrophage_unactivated | -1.354 | -0.625 |
| IL1 | -1.987 | -1.48 |
| Rapamycin | -2.056 | -1.97 |
| Tcell | -2.63 | -1.659 |
| GMCSF | -0.401 | 0.153 |
| IFNab | 0.242 | 0.133 |
| IFNg | -0.345 | 0.118 |
| IFNg_GMCSF1 | 0.129 | 0.16 |
| Rv1432_day32 | 0.795 | 0.408 |
| Rv1565c_day32 | -0.12 | -1.906 |
| secA2_input | -2.674 | -0.794 |
| delta_Rv3594 | 0.17 | 0.233 |
| delta_Rv3717 | 0.853 | 0.568 |
| delta_Rv3811 | -0.156 | -0.098 |
| delta_Rv0954 | 1.043 | 0.382 |
| PonA1 | -0.157 | 0.272 |
| EccD1_KO | -0.382 | -0.579 |
| EspI_KO | -0.128 | -0.613 |
| PE35_KO | -0.131 | -0.213 |
| PPE68_KO | 0.141 | 0.179 |
| glycerol2 | -1.197 | -0.254 |
| lignocerate | -2.809 | -2.656 |
| oleate | 0.631 | 0.759 |
| phosphatidylcholine | -1.627 | -0.725 |
| acetate | -0.447 | 0.658 |
| glucAc | -1.561 | 0.451 |
| Rv0950ko | -1.26 | 0.513 |
| Rv1096ko | -0.835 | -0.018 |
| Rv3684ko | -0.377 | 0.537 |
| delta_otsA_trehalose | -1.304 | 0.014 |