Top 10 genes with highest correlation to Rv0168/yrbE1B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0169/mce1A | (cc=0.8245) | info on Rv0169/mce1A |
| Rv0171/mce1C | (cc=0.8116) | info on Rv0171/mce1C |
| Rv0172/mce1D | (cc=0.7962) | info on Rv0172/mce1D |
| Rv0173/lprK | (cc=0.7901) | info on Rv0173/lprK |
| Rv0174/mce1F | (cc=0.7761) | info on Rv0174/mce1F |
| Rv0177/- | (cc=0.7528) | info on Rv0177/- |
| Rv0178/- | (cc=0.7402) | info on Rv0178/- |
| Rv0167/yrbE1A | (cc=0.7342) | info on Rv0167/yrbE1A |
| Rv0176/- | (cc=0.7195) | info on Rv0176/- |
| Rv0175/- | (cc=0.7152) | info on Rv0175/- |
Correlation of Rv0168/yrbE1B with Rv0169/mce1A
Normalized LFCs for Rv0168/yrbE1B:
(description and provenance of datasets)
| Rv0168/yrbE1B | Rv0169/mce1A | |
| Fe_supp_jason_reseq | 0.398 | 0.674 |
| low_pH_jason_reseq | 0.564 | 0.581 |
| NO_jason_reseq | 1.838 | 2.46 |
| B6_jason_reseq | 1.484 | 0.209 |
| MHCII_jason_reseq | -0.754 | -0.879 |
| Isoniazid02 | -0.834 | -0.501 |
| Rifampicin4 | 1.392 | 1.451 |
| Ethambutol3 | -0.75 | 0.444 |
| Meropenem3 | 1.799 | 2.361 |
| Vancomycin16 | 1.409 | 1.825 |
| Rv2680_day32 | 1.372 | 0.351 |
| H37Rv_KO_MarP | 0.573 | 0.457 |
| hypoxia_3wks | 1.774 | 2.173 |
| hypoxia_6wks | 1.159 | 2.222 |
| glycerol | 0.233 | 0.388 |
| cholesterol | 3.311 | 1.052 |
| AJ | 0.316 | -0.168 |
| Bibs02 | -2.281 | -2.951 |
| Bibs02c | -3.139 | -2.284 |
| BL6 | -0.045 | 0.631 |
| BL6a | -1.406 | -1.444 |
| BXD01 | -0.088 | 0.805 |
| BXD010 | -0.098 | 0.846 |
| BXD011 | -0.004 | 0.412 |
| BXD03 | 0.356 | 0.827 |
| BXD04 | 0.64 | 0.592 |
| BXD05 | -0.537 | 0.512 |
| BXD06 | -0.416 | 0.075 |
| BXD07 | -0.119 | 0.797 |
| BXD08 | -0.19 | 0.301 |
| BXD09 | 0.405 | 0.734 |
| CAST | -0.662 | -0.766 |
| CCcont | -0.564 | -0.006 |
| DS01 | -2.563 | -2.392 |
| DS02 | -1.432 | -1.793 |
| DS04 | -0.27 | -0.783 |
| DS0c | -1.925 | -2.292 |
| GP01 | -2.017 | -1.538 |
| GP02 | -1.527 | -1.501 |
| GP0c | -0.993 | -0.702 |
| NOD | 0.905 | -0.163 |
| NZO | 0.958 | 1.186 |
| PWK | -1.498 | -1.319 |
| H37Rv_KO_CtpC | -1.22 | -0.468 |
| H37Rv_KO_CtpD | -0.168 | -0.573 |
| H37Rv_KO_Rv1272 | -0.83 | 0.587 |
| H37Rv_KO_SugABC | 0.893 | 1.394 |
| H37Rv_KO_MbtN | -1.316 | 0.256 |
| Trans05 | -0.345 | 0.501 |
| macrophage_unactivated | 0.022 | -0.625 |
| IL1 | -1.786 | -1.48 |
| Rapamycin | -1.636 | -1.97 |
| Tcell | -2.027 | -1.659 |
| GMCSF | -0.071 | 0.153 |
| IFNab | 0.475 | 0.133 |
| IFNg | 0.371 | 0.118 |
| IFNg_GMCSF1 | -0.17 | 0.16 |
| Rv1432_day32 | 1.561 | 0.408 |
| Rv1565c_day32 | -2.834 | -1.906 |
| secA2_input | -0.787 | -0.794 |
| delta_Rv3594 | -0.352 | 0.233 |
| delta_Rv3717 | 0.196 | 0.568 |
| delta_Rv3811 | -0.839 | -0.098 |
| delta_Rv0954 | 0.973 | 0.382 |
| PonA1 | 0.388 | 0.272 |
| EccD1_KO | 0.96 | -0.579 |
| EspI_KO | 0.436 | -0.613 |
| PE35_KO | -0.575 | -0.213 |
| PPE68_KO | -0.41 | 0.179 |
| glycerol2 | -1.575 | -0.254 |
| lignocerate | -3.529 | -2.656 |
| oleate | -0.639 | 0.759 |
| phosphatidylcholine | -2.092 | -0.725 |
| acetate | 0.209 | 0.658 |
| glucAc | -0.52 | 0.451 |
| Rv0950ko | -0.115 | 0.513 |
| Rv1096ko | -0.151 | -0.018 |
| Rv3684ko | 0.799 | 0.537 |
| delta_otsA_trehalose | -0.4 | 0.014 |