Top 10 genes with highest correlation to Rv0157A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0171/mce1C | (cc=0.4061) | info on Rv0171/mce1C |
| Rv2275/- | (cc=0.3963) | info on Rv2275/- |
| Rv0056/rplI | (cc=0.3896) | info on Rv0056/rplI |
| Rv0153c/ptbB | (cc=0.3847) | info on Rv0153c/ptbB |
| Rv1424c/- | (cc=0.3764) | info on Rv1424c/- |
| Rv3311/- | (cc=0.3603) | info on Rv3311/- |
| Rv2353c/PPE39 | (cc=0.3553) | info on Rv2353c/PPE39 |
| Rv0167/yrbE1A | (cc=0.3543) | info on Rv0167/yrbE1A |
| Rv0177/- | (cc=0.3529) | info on Rv0177/- |
| Rv1400c/lipI | (cc=0.3528) | info on Rv1400c/lipI |
Correlation of Rv0157A/- with Rv0171/mce1C
Normalized LFCs for Rv0157A/-:
(description and provenance of datasets)
| Rv0157A/- | Rv0171/mce1C | |
| Fe_supp_jason_reseq | 0.63 | 0.729 |
| low_pH_jason_reseq | 0.371 | 0.932 |
| NO_jason_reseq | 0.058 | 2.15 |
| B6_jason_reseq | -0.544 | 0.276 |
| MHCII_jason_reseq | -0.935 | -0.826 |
| Isoniazid02 | -0.156 | -0.551 |
| Rifampicin4 | -1.313 | 1.367 |
| Ethambutol3 | -0.492 | -0.477 |
| Meropenem3 | -0.998 | 2.493 |
| Vancomycin16 | -0.284 | 1.417 |
| Rv2680_day32 | -0.305 | -0.181 |
| H37Rv_KO_MarP | 0.399 | 0.507 |
| hypoxia_3wks | 0.379 | 1.34 |
| hypoxia_6wks | -0.816 | 2.261 |
| glycerol | -1.053 | -0.761 |
| cholesterol | -0.055 | 0.785 |
| AJ | -1.21 | -0.437 |
| Bibs02 | 0.132 | -2.117 |
| Bibs02c | -3.193 | -3.263 |
| BL6 | 0.292 | 0.121 |
| BL6a | -0.646 | -1.697 |
| BXD01 | -0.944 | 0.102 |
| BXD010 | -2.061 | -0.249 |
| BXD011 | 0.646 | 0.28 |
| BXD03 | 0.098 | 0.106 |
| BXD04 | -0.764 | 0.161 |
| BXD05 | -1.762 | 0.243 |
| BXD06 | 0.0 | -0.521 |
| BXD07 | -0.194 | 0.244 |
| BXD08 | 0.119 | 0.261 |
| BXD09 | -0.137 | 0.517 |
| CAST | -1.847 | -0.305 |
| CCcont | 1.054 | -0.352 |
| DS01 | -1.54 | -2.267 |
| DS02 | -2.71 | -1.913 |
| DS04 | -0.037 | -1.127 |
| DS0c | -1.065 | -2.109 |
| GP01 | -1.589 | -0.936 |
| GP02 | 0.822 | -0.704 |
| GP0c | -1.209 | -0.846 |
| NOD | 1.087 | 0.493 |
| NZO | 1.331 | 1.046 |
| PWK | -1.653 | -1.459 |
| H37Rv_KO_CtpC | -1.835 | -0.931 |
| H37Rv_KO_CtpD | -0.584 | -0.329 |
| H37Rv_KO_Rv1272 | 2.89 | 0.326 |
| H37Rv_KO_SugABC | 2.096 | 0.868 |
| H37Rv_KO_MbtN | 0.677 | 0.41 |
| Trans05 | 0.922 | 0.619 |
| macrophage_unactivated | -0.65 | -0.363 |
| IL1 | -1.821 | -1.353 |
| Rapamycin | 0.117 | -1.274 |
| Tcell | -1.209 | -1.528 |
| GMCSF | 0.293 | 0.18 |
| IFNab | 0.172 | 0.877 |
| IFNg | 0.788 | 0.334 |
| IFNg_GMCSF1 | -1.244 | 1.134 |
| Rv1432_day32 | -0.289 | 0.087 |
| Rv1565c_day32 | 1.433 | -1.398 |
| secA2_input | 0.091 | 0.69 |
| delta_Rv3594 | -0.095 | -0.098 |
| delta_Rv3717 | -0.193 | -0.05 |
| delta_Rv3811 | 0.122 | -0.339 |
| delta_Rv0954 | 0.062 | -0.403 |
| PonA1 | 0.121 | -0.132 |
| EccD1_KO | 0.654 | 0.191 |
| EspI_KO | 0.163 | 0.145 |
| PE35_KO | -0.353 | 0.432 |
| PPE68_KO | -0.595 | 0.365 |
| glycerol2 | -2.708 | -0.687 |
| lignocerate | -2.06 | -2.406 |
| oleate | -0.981 | 0.051 |
| phosphatidylcholine | -1.828 | -1.174 |
| acetate | -0.973 | 0.427 |
| glucAc | -0.405 | 0.133 |
| Rv0950ko | -0.944 | -0.404 |
| Rv1096ko | -0.814 | -0.259 |
| Rv3684ko | -1.477 | 0.38 |
| delta_otsA_trehalose | -2.394 | 0.074 |