Top 10 genes with highest correlation to Rv0137c/msrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0844c/narL | (cc=0.5839) | info on Rv0844c/narL |
| Rv3628/ppa | (cc=0.5817) | info on Rv3628/ppa |
| Rv0742/PE_PGRS8 | (cc=0.5549) | info on Rv0742/PE_PGRS8 |
| Rv0188/- | (cc=0.5007) | info on Rv0188/- |
| Rv1776c/- | (cc=0.4892) | info on Rv1776c/- |
| Rv0647c/- | (cc=0.4839) | info on Rv0647c/- |
| Rv3389c/htdY | (cc=0.4778) | info on Rv3389c/htdY |
| Rv3533c/PPE62 | (cc=0.474) | info on Rv3533c/PPE62 |
| Rv3427c/- | (cc=0.4578) | info on Rv3427c/- |
| Rv1787/PPE25 | (cc=0.4528) | info on Rv1787/PPE25 |
Correlation of Rv0137c/msrA with Rv0742/PE_PGRS8
Normalized LFCs for Rv0137c/msrA:
(description and provenance of datasets)
| Rv0137c/msrA | Rv0742/PE_PGRS8 | |
| Fe_supp_jason_reseq | -1.208 | -1.888 |
| low_pH_jason_reseq | -1.256 | 0.562 |
| NO_jason_reseq | 0.108 | -0.538 |
| B6_jason_reseq | -0.5 | -1.831 |
| MHCII_jason_reseq | -0.803 | -2.072 |
| Isoniazid02 | 0.029 | -0.065 |
| Rifampicin4 | 0.287 | 1.616 |
| Ethambutol3 | -0.22 | -0.044 |
| Meropenem3 | -0.259 | 0.386 |
| Vancomycin16 | -0.027 | -0.024 |
| Rv2680_day32 | -0.369 | 0.605 |
| H37Rv_KO_MarP | 0.429 | 0.477 |
| hypoxia_3wks | 0.0 | 0.833 |
| hypoxia_6wks | -0.532 | -1.088 |
| glycerol | -0.32 | 0.045 |
| cholesterol | -0.83 | -0.366 |
| AJ | 0.556 | 0.128 |
| Bibs02 | -0.828 | -0.36 |
| Bibs02c | 0.067 | 0.799 |
| BL6 | 0.475 | 1.464 |
| BL6a | 0.611 | 1.39 |
| BXD01 | 0.295 | 1.329 |
| BXD010 | -0.24 | 0.519 |
| BXD011 | 0.202 | 1.026 |
| BXD03 | -0.349 | 1.328 |
| BXD04 | 1.529 | 0.0 |
| BXD05 | 0.054 | 1.827 |
| BXD06 | 0.294 | 0.571 |
| BXD07 | -0.142 | 0.83 |
| BXD08 | 0.084 | 1.234 |
| BXD09 | -0.469 | 1.298 |
| CAST | -0.571 | 1.053 |
| CCcont | 0.048 | 1.218 |
| DS01 | 0.358 | 0.587 |
| DS02 | -0.654 | 0.21 |
| DS04 | -0.032 | 0.266 |
| DS0c | -0.053 | -0.341 |
| GP01 | 1.497 | 2.262 |
| GP02 | 0.589 | 1.611 |
| GP0c | 0.942 | 1.126 |
| NOD | -1.193 | -0.6 |
| NZO | 0.92 | -0.448 |
| PWK | 0.155 | 0.573 |
| H37Rv_KO_CtpC | -0.013 | 1.092 |
| H37Rv_KO_CtpD | 0.466 | 0.494 |
| H37Rv_KO_Rv1272 | 0.613 | 0.94 |
| H37Rv_KO_SugABC | 0.15 | 0.915 |
| H37Rv_KO_MbtN | 0.507 | 0.937 |
| Trans05 | 0.305 | 1.328 |
| macrophage_unactivated | 0.139 | 0.922 |
| IL1 | -0.78 | 0.581 |
| Rapamycin | 0.181 | 0.703 |
| Tcell | 0.639 | 0.766 |
| GMCSF | 0.304 | 1.328 |
| IFNab | -0.85 | 0.287 |
| IFNg | -0.561 | -0.561 |
| IFNg_GMCSF1 | -0.5 | 0.229 |
| Rv1432_day32 | -0.506 | 1.042 |
| Rv1565c_day32 | -0.452 | -1.703 |
| secA2_input | 0.279 | 1.249 |
| delta_Rv3594 | -1.614 | -0.405 |
| delta_Rv3717 | -0.863 | -0.447 |
| delta_Rv3811 | -2.278 | -0.428 |
| delta_Rv0954 | -0.65 | -0.868 |
| PonA1 | -1.814 | -2.069 |
| EccD1_KO | 0.592 | -0.257 |
| EspI_KO | -0.411 | -0.807 |
| PE35_KO | 0.079 | -0.166 |
| PPE68_KO | 0.0 | 0.0 |
| glycerol2 | 0.432 | 0.792 |
| lignocerate | 0.483 | 0.737 |
| oleate | 0.156 | 1.311 |
| phosphatidylcholine | -0.21 | 1.045 |
| acetate | 0.161 | 0.359 |
| glucAc | 0.354 | 0.254 |
| Rv0950ko | -0.546 | -0.205 |
| Rv1096ko | -0.425 | -0.54 |
| Rv3684ko | -0.462 | -0.793 |
| delta_otsA_trehalose | -0.943 | -0.388 |