Top 10 genes with highest correlation to Rv0134/ephF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2914c/pknI | (cc=0.549) | info on Rv2914c/pknI |
| Rv3896c/- | (cc=0.5341) | info on Rv3896c/- |
| Rv0327c/cyp135A1 | (cc=0.5183) | info on Rv0327c/cyp135A1 |
| Rv3026c/- | (cc=0.504) | info on Rv3026c/- |
| Rv0530/- | (cc=0.4818) | info on Rv0530/- |
| Rv3786c/- | (cc=0.4778) | info on Rv3786c/- |
| Rv3522/ltp4 | (cc=0.473) | info on Rv3522/ltp4 |
| Rv0897c/- | (cc=0.4604) | info on Rv0897c/- |
| Rv0858c/dapC | (cc=0.4531) | info on Rv0858c/dapC |
| Rv0648/- | (cc=0.4515) | info on Rv0648/- |
Correlation of Rv0134/ephF with Rv3522/ltp4
Normalized LFCs for Rv0134/ephF:
(description and provenance of datasets)
| Rv0134/ephF | Rv3522/ltp4 | |
| Fe_supp_jason_reseq | -0.568 | -0.17 |
| low_pH_jason_reseq | -0.688 | -0.097 |
| NO_jason_reseq | 0.391 | 0.289 |
| B6_jason_reseq | 0.413 | -0.446 |
| MHCII_jason_reseq | 0.941 | 0.866 |
| Isoniazid02 | -0.345 | -0.511 |
| Rifampicin4 | 0.0 | -0.068 |
| Ethambutol3 | -0.461 | 0.068 |
| Meropenem3 | 0.271 | 0.159 |
| Vancomycin16 | -0.273 | -0.202 |
| Rv2680_day32 | -0.09 | -1.285 |
| H37Rv_KO_MarP | 0.213 | 0.134 |
| hypoxia_3wks | -0.478 | -0.678 |
| hypoxia_6wks | -0.106 | -0.046 |
| glycerol | 0.168 | -0.508 |
| cholesterol | -0.859 | -0.439 |
| AJ | 0.077 | -0.682 |
| Bibs02 | -0.449 | -0.203 |
| Bibs02c | 0.759 | 0.546 |
| BL6 | 0.587 | -0.62 |
| BL6a | 0.639 | 0.495 |
| BXD01 | -0.265 | -0.163 |
| BXD010 | -0.255 | 0.202 |
| BXD011 | 0.421 | -0.208 |
| BXD03 | 0.226 | 0.433 |
| BXD04 | -0.24 | -0.385 |
| BXD05 | 0.463 | 0.476 |
| BXD06 | 0.175 | -0.009 |
| BXD07 | -0.048 | 0.31 |
| BXD08 | 0.152 | -0.081 |
| BXD09 | 0.292 | -0.451 |
| CAST | 0.792 | -0.759 |
| CCcont | -0.331 | 0.114 |
| DS01 | 0.229 | -0.315 |
| DS02 | 0.249 | -0.493 |
| DS04 | 1.152 | 0.818 |
| DS0c | 0.445 | 0.097 |
| GP01 | 0.371 | 0.451 |
| GP02 | 1.127 | 0.793 |
| GP0c | 0.279 | 0.565 |
| NOD | 0.404 | -0.952 |
| NZO | 0.345 | 0.14 |
| PWK | 0.566 | -0.013 |
| H37Rv_KO_CtpC | -0.114 | -1.024 |
| H37Rv_KO_CtpD | -0.348 | -0.537 |
| H37Rv_KO_Rv1272 | -0.224 | 0.576 |
| H37Rv_KO_SugABC | 0.588 | 0.481 |
| H37Rv_KO_MbtN | 0.961 | -0.285 |
| Trans05 | -0.302 | -0.145 |
| macrophage_unactivated | 0.069 | -0.436 |
| IL1 | 0.018 | -0.86 |
| Rapamycin | -0.034 | -0.276 |
| Tcell | 0.072 | -0.036 |
| GMCSF | 1.098 | 0.114 |
| IFNab | -0.121 | 0.033 |
| IFNg | 0.596 | -0.433 |
| IFNg_GMCSF1 | 1.037 | 0.427 |
| Rv1432_day32 | 0.224 | -0.353 |
| Rv1565c_day32 | 0.188 | 0.829 |
| secA2_input | 0.297 | 0.845 |
| delta_Rv3594 | -0.197 | -1.196 |
| delta_Rv3717 | 0.127 | -0.95 |
| delta_Rv3811 | -0.132 | -0.761 |
| delta_Rv0954 | -0.098 | -0.509 |
| PonA1 | 0.698 | -0.233 |
| EccD1_KO | 0.421 | -0.194 |
| EspI_KO | -0.351 | 0.046 |
| PE35_KO | -0.621 | -0.569 |
| PPE68_KO | -0.682 | -0.595 |
| glycerol2 | 0.265 | 0.947 |
| lignocerate | 0.952 | 1.382 |
| oleate | -0.6 | 0.0 |
| phosphatidylcholine | 0.326 | 1.098 |
| acetate | 0.51 | 1.273 |
| glucAc | 0.706 | 0.994 |
| Rv0950ko | 0.986 | 1.055 |
| Rv1096ko | 1.692 | 0.651 |
| Rv3684ko | 1.657 | 0.707 |
| delta_otsA_trehalose | -0.613 | 0.066 |