Top 10 genes with highest correlation to Rv0133/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0036c/- | (cc=0.5195) | info on Rv0036c/- |
| Rv2642/- | (cc=0.5169) | info on Rv2642/- |
| Rv0421c/- | (cc=0.4956) | info on Rv0421c/- |
| Rv0377/- | (cc=0.4759) | info on Rv0377/- |
| Rv3704c/gshA | (cc=0.4758) | info on Rv3704c/gshA |
| Rv2917/- | (cc=0.4729) | info on Rv2917/- |
| Rv3744/nmtR | (cc=0.4681) | info on Rv3744/nmtR |
| Rv1859/modC | (cc=0.4663) | info on Rv1859/modC |
| Rv0841/- | (cc=0.4648) | info on Rv0841/- |
| Rv0481c/- | (cc=0.464) | info on Rv0481c/- |
Correlation of Rv0133/- with Rv2642/-
Normalized LFCs for Rv0133/-:
(description and provenance of datasets)
| Rv0133/- | Rv2642/- | |
| Fe_supp_jason_reseq | -0.493 | 0.534 |
| low_pH_jason_reseq | -1.347 | -1.188 |
| NO_jason_reseq | 0.186 | 1.089 |
| B6_jason_reseq | -0.893 | -0.717 |
| MHCII_jason_reseq | -0.131 | 0.189 |
| Isoniazid02 | 0.079 | -0.607 |
| Rifampicin4 | 0.271 | -1.451 |
| Ethambutol3 | 0.106 | -0.18 |
| Meropenem3 | 0.049 | 0.401 |
| Vancomycin16 | 0.019 | -0.814 |
| Rv2680_day32 | -2.344 | -1.039 |
| H37Rv_KO_MarP | 0.025 | -0.498 |
| hypoxia_3wks | -0.167 | 1.368 |
| hypoxia_6wks | -0.495 | 0.211 |
| glycerol | 0.309 | 1.198 |
| cholesterol | 0.255 | 1.021 |
| AJ | 0.269 | -0.743 |
| Bibs02 | -0.683 | -0.026 |
| Bibs02c | -0.203 | -0.826 |
| BL6 | -0.925 | -3.323 |
| BL6a | -0.641 | -0.882 |
| BXD01 | -0.334 | -1.008 |
| BXD010 | -0.618 | -0.453 |
| BXD011 | -0.919 | -0.655 |
| BXD03 | 0.102 | -0.25 |
| BXD04 | -1.277 | -1.593 |
| BXD05 | -1.169 | -0.682 |
| BXD06 | -1.062 | -1.033 |
| BXD07 | -0.749 | -1.235 |
| BXD08 | -1.405 | -0.47 |
| BXD09 | -0.753 | -0.815 |
| CAST | -0.47 | 0.564 |
| CCcont | -2.318 | -2.885 |
| DS01 | -0.293 | 0.281 |
| DS02 | -0.978 | 0.35 |
| DS04 | 0.069 | 0.197 |
| DS0c | -0.729 | 0.368 |
| GP01 | -0.395 | -0.182 |
| GP02 | 0.048 | -1.424 |
| GP0c | -0.192 | 0.241 |
| NOD | -1.01 | 1.132 |
| NZO | 0.361 | -0.019 |
| PWK | -0.065 | -1.239 |
| H37Rv_KO_CtpC | -0.76 | -1.486 |
| H37Rv_KO_CtpD | 0.702 | 0.358 |
| H37Rv_KO_Rv1272 | -0.742 | 0.222 |
| H37Rv_KO_SugABC | 0.621 | 1.045 |
| H37Rv_KO_MbtN | -1.933 | -1.097 |
| Trans05 | -0.844 | 1.047 |
| macrophage_unactivated | -0.963 | -1.354 |
| IL1 | -1.183 | -0.062 |
| Rapamycin | -0.862 | -0.629 |
| Tcell | -0.834 | -0.323 |
| GMCSF | -0.351 | -1.745 |
| IFNab | -0.922 | 0.033 |
| IFNg | -0.053 | -1.384 |
| IFNg_GMCSF1 | 1.405 | 0.707 |
| Rv1432_day32 | 0.112 | 0.596 |
| Rv1565c_day32 | -0.126 | 1.041 |
| secA2_input | 0.437 | 1.077 |
| delta_Rv3594 | -0.13 | -0.626 |
| delta_Rv3717 | -0.045 | -0.617 |
| delta_Rv3811 | 0.0 | -0.344 |
| delta_Rv0954 | 0.634 | 0.023 |
| PonA1 | 0.997 | 1.382 |
| EccD1_KO | -0.069 | 0.145 |
| EspI_KO | -0.242 | 0.414 |
| PE35_KO | -1.205 | -0.114 |
| PPE68_KO | -1.389 | -0.515 |
| glycerol2 | -1.709 | 0.273 |
| lignocerate | -0.971 | -0.623 |
| oleate | -0.371 | 1.224 |
| phosphatidylcholine | -1.203 | 0.217 |
| acetate | 0.012 | -1.386 |
| glucAc | -1.935 | -4.616 |
| Rv0950ko | 0.229 | 0.365 |
| Rv1096ko | 0.823 | 1.339 |
| Rv3684ko | 0.167 | 0.216 |
| delta_otsA_trehalose | 0.906 | 2.703 |