Top 10 genes with highest correlation to Rv0133/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0036c/- | (cc=0.5195) | info on Rv0036c/- |
| Rv2642/- | (cc=0.5169) | info on Rv2642/- |
| Rv0421c/- | (cc=0.4956) | info on Rv0421c/- |
| Rv0377/- | (cc=0.4759) | info on Rv0377/- |
| Rv3704c/gshA | (cc=0.4758) | info on Rv3704c/gshA |
| Rv2917/- | (cc=0.4729) | info on Rv2917/- |
| Rv3744/nmtR | (cc=0.4681) | info on Rv3744/nmtR |
| Rv1859/modC | (cc=0.4663) | info on Rv1859/modC |
| Rv0841/- | (cc=0.4648) | info on Rv0841/- |
| Rv0481c/- | (cc=0.464) | info on Rv0481c/- |
Correlation of Rv0133/- with Rv1859/modC
Normalized LFCs for Rv0133/-:
(description and provenance of datasets)
| Rv0133/- | Rv1859/modC | |
| Fe_supp_jason_reseq | -0.493 | 0.354 |
| low_pH_jason_reseq | -1.347 | -0.425 |
| NO_jason_reseq | 0.186 | 0.213 |
| B6_jason_reseq | -0.893 | -0.888 |
| MHCII_jason_reseq | -0.131 | 1.128 |
| Isoniazid02 | 0.079 | 0.486 |
| Rifampicin4 | 0.271 | -0.06 |
| Ethambutol3 | 0.106 | -0.249 |
| Meropenem3 | 0.049 | -0.109 |
| Vancomycin16 | 0.019 | -0.305 |
| Rv2680_day32 | -2.344 | 0.0 |
| H37Rv_KO_MarP | 0.025 | 0.524 |
| hypoxia_3wks | -0.167 | -0.032 |
| hypoxia_6wks | -0.495 | -0.651 |
| glycerol | 0.309 | -0.538 |
| cholesterol | 0.255 | 0.184 |
| AJ | 0.269 | -0.092 |
| Bibs02 | -0.683 | 0.232 |
| Bibs02c | -0.203 | 0.69 |
| BL6 | -0.925 | -2.31 |
| BL6a | -0.641 | 0.42 |
| BXD01 | -0.334 | -0.804 |
| BXD010 | -0.618 | -1.119 |
| BXD011 | -0.919 | -0.11 |
| BXD03 | 0.102 | -0.43 |
| BXD04 | -1.277 | -0.616 |
| BXD05 | -1.169 | -0.329 |
| BXD06 | -1.062 | -0.386 |
| BXD07 | -0.749 | -0.661 |
| BXD08 | -1.405 | -0.831 |
| BXD09 | -0.753 | -0.524 |
| CAST | -0.47 | -0.133 |
| CCcont | -2.318 | -1.901 |
| DS01 | -0.293 | 0.207 |
| DS02 | -0.978 | 0.009 |
| DS04 | 0.069 | 0.091 |
| DS0c | -0.729 | -0.346 |
| GP01 | -0.395 | 0.306 |
| GP02 | 0.048 | -0.397 |
| GP0c | -0.192 | -1.149 |
| NOD | -1.01 | 0.412 |
| NZO | 0.361 | 0.11 |
| PWK | -0.065 | -0.695 |
| H37Rv_KO_CtpC | -0.76 | -0.891 |
| H37Rv_KO_CtpD | 0.702 | 0.616 |
| H37Rv_KO_Rv1272 | -0.742 | -0.784 |
| H37Rv_KO_SugABC | 0.621 | 0.174 |
| H37Rv_KO_MbtN | -1.933 | -1.328 |
| Trans05 | -0.844 | -0.537 |
| macrophage_unactivated | -0.963 | -0.439 |
| IL1 | -1.183 | -0.024 |
| Rapamycin | -0.862 | 0.0 |
| Tcell | -0.834 | -0.922 |
| GMCSF | -0.351 | 1.537 |
| IFNab | -0.922 | 0.405 |
| IFNg | -0.053 | 0.043 |
| IFNg_GMCSF1 | 1.405 | -0.226 |
| Rv1432_day32 | 0.112 | -0.25 |
| Rv1565c_day32 | -0.126 | 0.084 |
| secA2_input | 0.437 | 0.05 |
| delta_Rv3594 | -0.13 | 0.255 |
| delta_Rv3717 | -0.045 | 0.248 |
| delta_Rv3811 | 0.0 | 0.923 |
| delta_Rv0954 | 0.634 | 0.376 |
| PonA1 | 0.997 | 0.304 |
| EccD1_KO | -0.069 | -0.901 |
| EspI_KO | -0.242 | -0.394 |
| PE35_KO | -1.205 | -2.042 |
| PPE68_KO | -1.389 | -1.894 |
| glycerol2 | -1.709 | -0.514 |
| lignocerate | -0.971 | -0.477 |
| oleate | -0.371 | -0.332 |
| phosphatidylcholine | -1.203 | -0.056 |
| acetate | 0.012 | -0.223 |
| glucAc | -1.935 | -0.945 |
| Rv0950ko | 0.229 | 0.217 |
| Rv1096ko | 0.823 | -0.618 |
| Rv3684ko | 0.167 | 0.855 |
| delta_otsA_trehalose | 0.906 | 0.535 |