Top 10 genes with highest correlation to Rv0124/PE_PGRS2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0620/galK | (cc=0.4403) | info on Rv0620/galK |
| Rv0094c/- | (cc=0.424) | info on Rv0094c/- |
| Rv0279c/PE_PGRS4 | (cc=0.42) | info on Rv0279c/PE_PGRS4 |
| Rv0578c/PE_PGRS7 | (cc=0.4139) | info on Rv0578c/PE_PGRS7 |
| Rv3467/- | (cc=0.4137) | info on Rv3467/- |
| Rv1091/PE_PGRS22 | (cc=0.4132) | info on Rv1091/PE_PGRS22 |
| Rv3345c/PE_PGRS50 | (cc=0.4093) | info on Rv3345c/PE_PGRS50 |
| Rv0393/- | (cc=0.4032) | info on Rv0393/- |
| Rv1818c/PE_PGRS33 | (cc=0.4028) | info on Rv1818c/PE_PGRS33 |
| Rv1468c/PE_PGRS29 | (cc=0.4008) | info on Rv1468c/PE_PGRS29 |
Correlation of Rv0124/PE_PGRS2 with Rv1468c/PE_PGRS29
Normalized LFCs for Rv0124/PE_PGRS2:
(description and provenance of datasets)
| Rv0124/PE_PGRS2 | Rv1468c/PE_PGRS29 | |
| Fe_supp_jason_reseq | -0.627 | 0.425 |
| low_pH_jason_reseq | -0.284 | 0.274 |
| NO_jason_reseq | -0.525 | -1.229 |
| B6_jason_reseq | -0.542 | -0.718 |
| MHCII_jason_reseq | -0.477 | -0.801 |
| Isoniazid02 | -0.535 | 0.303 |
| Rifampicin4 | 0.671 | 1.968 |
| Ethambutol3 | 1.019 | 1.278 |
| Meropenem3 | 0.26 | 1.473 |
| Vancomycin16 | 0.048 | 0.43 |
| Rv2680_day32 | -0.183 | -0.64 |
| H37Rv_KO_MarP | -0.109 | -0.049 |
| hypoxia_3wks | -0.407 | -0.694 |
| hypoxia_6wks | -1.155 | -0.735 |
| glycerol | 0.674 | 0.0 |
| cholesterol | -0.4 | -0.388 |
| AJ | 0.59 | 1.612 |
| Bibs02 | 0.874 | 0.389 |
| Bibs02c | 0.239 | 0.0 |
| BL6 | -0.502 | -0.835 |
| BL6a | -0.156 | 0.0 |
| BXD01 | 1.066 | 0.235 |
| BXD010 | -0.764 | -0.675 |
| BXD011 | -0.232 | -0.078 |
| BXD03 | -0.107 | -0.2 |
| BXD04 | 0.726 | 0.024 |
| BXD05 | 0.55 | 0.308 |
| BXD06 | -0.478 | -0.428 |
| BXD07 | 0.566 | 0.339 |
| BXD08 | 0.459 | 0.519 |
| BXD09 | 0.062 | 0.054 |
| CAST | 0.325 | 0.415 |
| CCcont | 0.15 | 0.168 |
| DS01 | 0.139 | 0.652 |
| DS02 | 0.797 | 0.789 |
| DS04 | 1.285 | 1.835 |
| DS0c | -0.556 | -0.178 |
| GP01 | 0.393 | 1.93 |
| GP02 | 1.174 | 0.863 |
| GP0c | 0.682 | 1.155 |
| NOD | 0.132 | -0.436 |
| NZO | 1.591 | 0.751 |
| PWK | 0.0 | 0.254 |
| H37Rv_KO_CtpC | 1.26 | 1.094 |
| H37Rv_KO_CtpD | -0.657 | 2.032 |
| H37Rv_KO_Rv1272 | 0.701 | 1.204 |
| H37Rv_KO_SugABC | -1.391 | 0.346 |
| H37Rv_KO_MbtN | -0.369 | 1.692 |
| Trans05 | 0.0 | -0.193 |
| macrophage_unactivated | -0.11 | -0.117 |
| IL1 | -0.377 | -0.169 |
| Rapamycin | 0.0 | -0.608 |
| Tcell | -0.87 | 0.059 |
| GMCSF | -0.092 | 0.143 |
| IFNab | -1.203 | -0.599 |
| IFNg | 0.756 | -1.141 |
| IFNg_GMCSF1 | -0.644 | 0.798 |
| Rv1432_day32 | 0.205 | 0.07 |
| Rv1565c_day32 | 0.036 | -1.33 |
| secA2_input | 1.393 | -0.462 |
| delta_Rv3594 | 0.454 | 0.6 |
| delta_Rv3717 | 0.03 | 0.865 |
| delta_Rv3811 | 0.158 | 0.708 |
| delta_Rv0954 | 0.062 | 1.499 |
| PonA1 | 1.196 | 0.99 |
| EccD1_KO | -0.164 | -0.523 |
| EspI_KO | -1.657 | -0.787 |
| PE35_KO | -0.939 | -0.505 |
| PPE68_KO | -0.413 | -0.291 |
| glycerol2 | -0.128 | -0.22 |
| lignocerate | -0.055 | 0.033 |
| oleate | -0.043 | 0.057 |
| phosphatidylcholine | -0.41 | -0.262 |
| acetate | 0.768 | -0.163 |
| glucAc | 0.117 | -0.491 |
| Rv0950ko | 0.766 | 0.202 |
| Rv1096ko | 0.866 | -0.127 |
| Rv3684ko | 1.755 | 0.177 |
| delta_otsA_trehalose | 0.683 | 0.284 |