Top 10 genes with highest correlation to Rv0087/hycE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0945/- | (cc=0.5258) | info on Rv0945/- |
| Rv2632c/- | (cc=0.5227) | info on Rv2632c/- |
| Rv1751/- | (cc=0.4746) | info on Rv1751/- |
| Rv1237/sugB | (cc=0.4581) | info on Rv1237/sugB |
| Rv2475c/- | (cc=0.4189) | info on Rv2475c/- |
| Rv0690c/- | (cc=0.4174) | info on Rv0690c/- |
| Rv2085/- | (cc=0.4144) | info on Rv2085/- |
| Rv3553/- | (cc=0.414) | info on Rv3553/- |
| Rv3036c/TB22.2 | (cc=0.4093) | info on Rv3036c/TB22.2 |
| Rv2237/- | (cc=0.4086) | info on Rv2237/- |
Correlation of Rv0087/hycE with Rv1237/sugB
Normalized LFCs for Rv0087/hycE:
(description and provenance of datasets)
| Rv0087/hycE | Rv1237/sugB | |
| Fe_supp_jason_reseq | -0.805 | -0.022 |
| low_pH_jason_reseq | 0.669 | -0.246 |
| NO_jason_reseq | -0.806 | 1.024 |
| B6_jason_reseq | -1.289 | -1.975 |
| MHCII_jason_reseq | -1.136 | -2.918 |
| Isoniazid02 | -0.1 | -2.085 |
| Rifampicin4 | -0.482 | -1.847 |
| Ethambutol3 | -0.216 | -1.927 |
| Meropenem3 | 0.19 | -1.899 |
| Vancomycin16 | 0.422 | -1.279 |
| Rv2680_day32 | 1.605 | -1.013 |
| H37Rv_KO_MarP | 0.0 | 1.024 |
| hypoxia_3wks | 0.63 | 0.933 |
| hypoxia_6wks | 0.113 | 0.058 |
| glycerol | 0.721 | 0.054 |
| cholesterol | 0.108 | 0.183 |
| AJ | 0.56 | -2.318 |
| Bibs02 | -1.0 | -0.927 |
| Bibs02c | 0.44 | -2.24 |
| BL6 | 1.227 | -0.94 |
| BL6a | 0.416 | -1.6 |
| BXD01 | -0.051 | -0.843 |
| BXD010 | 0.742 | -1.577 |
| BXD011 | -0.213 | -0.35 |
| BXD03 | -0.053 | -1.173 |
| BXD04 | 0.178 | 0.66 |
| BXD05 | 0.239 | -0.939 |
| BXD06 | 0.192 | -0.566 |
| BXD07 | 0.2 | -0.966 |
| BXD08 | 0.963 | -0.734 |
| BXD09 | 0.463 | -0.776 |
| CAST | -0.385 | -2.644 |
| CCcont | 1.166 | 1.438 |
| DS01 | -0.621 | -1.648 |
| DS02 | -0.922 | -1.517 |
| DS04 | -0.156 | -1.938 |
| DS0c | 0.0 | -2.869 |
| GP01 | 0.55 | -0.639 |
| GP02 | -0.353 | -1.183 |
| GP0c | 0.097 | -0.268 |
| NOD | -1.715 | -2.405 |
| NZO | 0.657 | -1.101 |
| PWK | -1.073 | -2.252 |
| H37Rv_KO_CtpC | 0.288 | 0.814 |
| H37Rv_KO_CtpD | -0.612 | -0.642 |
| H37Rv_KO_Rv1272 | 0.424 | 0.336 |
| H37Rv_KO_SugABC | 0.208 | -0.593 |
| H37Rv_KO_MbtN | 0.946 | 1.136 |
| Trans05 | 1.991 | 0.068 |
| macrophage_unactivated | 0.511 | 0.126 |
| IL1 | -0.104 | 0.771 |
| Rapamycin | 0.104 | 1.0 |
| Tcell | -0.114 | 0.733 |
| GMCSF | -0.38 | -0.277 |
| IFNab | 0.302 | -0.384 |
| IFNg | -0.703 | -0.585 |
| IFNg_GMCSF1 | 0.314 | 0.248 |
| Rv1432_day32 | -0.368 | -2.295 |
| Rv1565c_day32 | -0.415 | -1.579 |
| secA2_input | 0.0 | -1.404 |
| delta_Rv3594 | 0.389 | 0.061 |
| delta_Rv3717 | 0.135 | 0.385 |
| delta_Rv3811 | 0.0 | -0.321 |
| delta_Rv0954 | 1.022 | 0.026 |
| PonA1 | 0.675 | -2.052 |
| EccD1_KO | 0.0 | -1.924 |
| EspI_KO | 1.275 | -0.125 |
| PE35_KO | 1.21 | 0.423 |
| PPE68_KO | 1.632 | 1.059 |
| glycerol2 | 0.392 | 1.432 |
| lignocerate | 0.91 | 1.642 |
| oleate | -0.403 | -0.569 |
| phosphatidylcholine | 0.332 | 1.763 |
| acetate | 1.531 | 1.513 |
| glucAc | 1.186 | 1.822 |
| Rv0950ko | -0.691 | -1.499 |
| Rv1096ko | 1.022 | -0.262 |
| Rv3684ko | 0.269 | -1.077 |
| delta_otsA_trehalose | 0.062 | 0.0 |