Top 10 genes with highest correlation to Rv0079/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2474c/- | (cc=0.6943) | info on Rv2474c/- |
Rv1160/mutT2 | (cc=0.6827) | info on Rv1160/mutT2 |
Rv0228/- | (cc=0.6357) | info on Rv0228/- |
Rv1070c/echA8 | (cc=0.6356) | info on Rv1070c/echA8 |
Rv3538/- | (cc=0.6105) | info on Rv3538/- |
Rv1323/fadA4 | (cc=0.6103) | info on Rv1323/fadA4 |
Rv2681/- | (cc=0.6072) | info on Rv2681/- |
Rv0428c/- | (cc=0.6006) | info on Rv0428c/- |
Rv0984/moaB2 | (cc=0.5977) | info on Rv0984/moaB2 |
Rv3354/- | (cc=0.5933) | info on Rv3354/- |
Correlation of Rv0079/- with Rv0984/moaB2
Normalized LFCs for Rv0079/-:
(description and provenance of datasets)
Rv0079/- | Rv0984/moaB2 | |
Fe_supp_jason_reseq | 0.786 | 2.846 |
low_pH_jason_reseq | -0.656 | -0.428 |
NO_jason_reseq | -3.499 | 0.0 |
B6_jason_reseq | -0.146 | 1.747 |
MHCII_jason_reseq | -0.022 | 1.01 |
Isoniazid02 | -0.172 | 0.298 |
Rifampicin4 | 0.295 | -0.152 |
Ethambutol3 | -0.063 | -0.098 |
Meropenem3 | 0.273 | 0.41 |
Vancomycin16 | 0.289 | -0.021 |
Rv2680_day32 | -1.975 | 1.149 |
H37Rv_KO_MarP | 0.454 | 0.793 |
hypoxia_3wks | -1.667 | 0.411 |
hypoxia_6wks | 0.155 | -0.071 |
glycerol | 0.554 | 0.503 |
cholesterol | 0.54 | -0.114 |
AJ | -0.837 | -0.044 |
Bibs02 | -0.076 | 0.181 |
Bibs02c | 0.265 | -0.52 |
BL6 | -1.84 | -0.782 |
BL6a | -1.356 | -0.903 |
BXD01 | -1.657 | -0.844 |
BXD010 | -1.017 | -1.868 |
BXD011 | -2.414 | -1.407 |
BXD03 | -0.69 | -1.531 |
BXD04 | -1.119 | -1.169 |
BXD05 | -1.056 | -1.475 |
BXD06 | -1.678 | -1.463 |
BXD07 | -0.972 | -1.256 |
BXD08 | -1.957 | -1.544 |
BXD09 | -1.809 | -1.296 |
CAST | 0.245 | -0.15 |
CCcont | -0.948 | -1.719 |
DS01 | -0.763 | -0.352 |
DS02 | -0.651 | 0.113 |
DS04 | -0.534 | 0.114 |
DS0c | -0.636 | 0.203 |
GP01 | -0.476 | -1.833 |
GP02 | -1.224 | 0.673 |
GP0c | -0.846 | -1.831 |
NOD | 0.988 | 0.104 |
NZO | -0.597 | -0.998 |
PWK | -0.165 | -0.558 |
H37Rv_KO_CtpC | -1.004 | -0.693 |
H37Rv_KO_CtpD | -0.481 | -3.93 |
H37Rv_KO_Rv1272 | -0.406 | -0.317 |
H37Rv_KO_SugABC | -0.436 | -2.356 |
H37Rv_KO_MbtN | -0.723 | 0.035 |
Trans05 | -1.393 | -1.69 |
macrophage_unactivated | -2.326 | -5.3 |
IL1 | -1.326 | -4.663 |
Rapamycin | -1.43 | -3.652 |
Tcell | -2.998 | -4.493 |
GMCSF | -2.36 | -3.44 |
IFNab | -1.862 | -5.424 |
IFNg | -4.022 | -4.525 |
IFNg_GMCSF1 | -3.098 | -5.455 |
Rv1432_day32 | -0.272 | 0.107 |
Rv1565c_day32 | 0.986 | -1.003 |
secA2_input | 0.0 | 0.98 |
delta_Rv3594 | 0.815 | 1.355 |
delta_Rv3717 | -0.327 | -1.133 |
delta_Rv3811 | 0.433 | 0.385 |
delta_Rv0954 | 1.545 | 1.774 |
PonA1 | 0.795 | 0.871 |
EccD1_KO | -0.148 | 0.339 |
EspI_KO | -0.148 | 1.743 |
PE35_KO | -1.009 | 0.823 |
PPE68_KO | -0.598 | 1.83 |
glycerol2 | 0.427 | 0.811 |
lignocerate | 0.111 | -0.329 |
oleate | -0.403 | -0.216 |
phosphatidylcholine | 0.232 | 0.494 |
acetate | 0.223 | -0.574 |
glucAc | 0.99 | -1.251 |
Rv0950ko | 0.703 | -0.654 |
Rv1096ko | 1.188 | -1.372 |
Rv3684ko | 0.364 | -0.321 |
delta_otsA_trehalose | 0.386 | 0.407 |