Top 10 genes with highest correlation to Rv0079/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2474c/- | (cc=0.6943) | info on Rv2474c/- |
| Rv1160/mutT2 | (cc=0.6827) | info on Rv1160/mutT2 |
| Rv0228/- | (cc=0.6357) | info on Rv0228/- |
| Rv1070c/echA8 | (cc=0.6356) | info on Rv1070c/echA8 |
| Rv3538/- | (cc=0.6105) | info on Rv3538/- |
| Rv1323/fadA4 | (cc=0.6103) | info on Rv1323/fadA4 |
| Rv2681/- | (cc=0.6072) | info on Rv2681/- |
| Rv0428c/- | (cc=0.6006) | info on Rv0428c/- |
| Rv0984/moaB2 | (cc=0.5977) | info on Rv0984/moaB2 |
| Rv3354/- | (cc=0.5933) | info on Rv3354/- |
Correlation of Rv0079/- with Rv0428c/-
Normalized LFCs for Rv0079/-:
(description and provenance of datasets)
| Rv0079/- | Rv0428c/- | |
| Fe_supp_jason_reseq | 0.786 | -0.09 |
| low_pH_jason_reseq | -0.656 | -1.191 |
| NO_jason_reseq | -3.499 | -2.987 |
| B6_jason_reseq | -0.146 | -0.13 |
| MHCII_jason_reseq | -0.022 | 0.189 |
| Isoniazid02 | -0.172 | 0.237 |
| Rifampicin4 | 0.295 | 0.336 |
| Ethambutol3 | -0.063 | 0.499 |
| Meropenem3 | 0.273 | 1.198 |
| Vancomycin16 | 0.289 | 0.276 |
| Rv2680_day32 | -1.975 | -0.979 |
| H37Rv_KO_MarP | 0.454 | 0.231 |
| hypoxia_3wks | -1.667 | -0.475 |
| hypoxia_6wks | 0.155 | -1.203 |
| glycerol | 0.554 | 1.201 |
| cholesterol | 0.54 | 1.063 |
| AJ | -0.837 | -0.766 |
| Bibs02 | -0.076 | 0.036 |
| Bibs02c | 0.265 | 0.196 |
| BL6 | -1.84 | -1.752 |
| BL6a | -1.356 | -0.452 |
| BXD01 | -1.657 | -2.035 |
| BXD010 | -1.017 | -1.421 |
| BXD011 | -2.414 | -1.785 |
| BXD03 | -0.69 | -2.685 |
| BXD04 | -1.119 | -1.12 |
| BXD05 | -1.056 | -2.507 |
| BXD06 | -1.678 | -1.821 |
| BXD07 | -0.972 | -1.577 |
| BXD08 | -1.957 | -1.235 |
| BXD09 | -1.809 | -2.078 |
| CAST | 0.245 | -0.554 |
| CCcont | -0.948 | -1.284 |
| DS01 | -0.763 | -0.719 |
| DS02 | -0.651 | -0.633 |
| DS04 | -0.534 | -1.041 |
| DS0c | -0.636 | -0.368 |
| GP01 | -0.476 | -0.453 |
| GP02 | -1.224 | 0.055 |
| GP0c | -0.846 | -0.558 |
| NOD | 0.988 | -1.098 |
| NZO | -0.597 | -0.142 |
| PWK | -0.165 | -0.139 |
| H37Rv_KO_CtpC | -1.004 | 0.42 |
| H37Rv_KO_CtpD | -0.481 | -2.221 |
| H37Rv_KO_Rv1272 | -0.406 | -0.374 |
| H37Rv_KO_SugABC | -0.436 | -1.637 |
| H37Rv_KO_MbtN | -0.723 | -0.235 |
| Trans05 | -1.393 | -1.124 |
| macrophage_unactivated | -2.326 | -2.484 |
| IL1 | -1.326 | -2.091 |
| Rapamycin | -1.43 | -1.55 |
| Tcell | -2.998 | -2.297 |
| GMCSF | -2.36 | -2.004 |
| IFNab | -1.862 | -1.817 |
| IFNg | -4.022 | -2.587 |
| IFNg_GMCSF1 | -3.098 | -1.515 |
| Rv1432_day32 | -0.272 | -0.64 |
| Rv1565c_day32 | 0.986 | -0.687 |
| secA2_input | 0.0 | 0.03 |
| delta_Rv3594 | 0.815 | -0.987 |
| delta_Rv3717 | -0.327 | -1.632 |
| delta_Rv3811 | 0.433 | -1.08 |
| delta_Rv0954 | 1.545 | -0.671 |
| PonA1 | 0.795 | 0.949 |
| EccD1_KO | -0.148 | 1.595 |
| EspI_KO | -0.148 | 1.463 |
| PE35_KO | -1.009 | 0.528 |
| PPE68_KO | -0.598 | 0.739 |
| glycerol2 | 0.427 | -0.38 |
| lignocerate | 0.111 | -0.575 |
| oleate | -0.403 | -0.133 |
| phosphatidylcholine | 0.232 | -0.661 |
| acetate | 0.223 | -1.516 |
| glucAc | 0.99 | -0.821 |
| Rv0950ko | 0.703 | -1.086 |
| Rv1096ko | 1.188 | 1.179 |
| Rv3684ko | 0.364 | 0.18 |
| delta_otsA_trehalose | 0.386 | -1.057 |