Top 10 genes with highest correlation to Rv0079/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2474c/- | (cc=0.6943) | info on Rv2474c/- |
| Rv1160/mutT2 | (cc=0.6827) | info on Rv1160/mutT2 |
| Rv0228/- | (cc=0.6357) | info on Rv0228/- |
| Rv1070c/echA8 | (cc=0.6356) | info on Rv1070c/echA8 |
| Rv3538/- | (cc=0.6105) | info on Rv3538/- |
| Rv1323/fadA4 | (cc=0.6103) | info on Rv1323/fadA4 |
| Rv2681/- | (cc=0.6072) | info on Rv2681/- |
| Rv0428c/- | (cc=0.6006) | info on Rv0428c/- |
| Rv0984/moaB2 | (cc=0.5977) | info on Rv0984/moaB2 |
| Rv3354/- | (cc=0.5933) | info on Rv3354/- |
Correlation of Rv0079/- with Rv2474c/-
Normalized LFCs for Rv0079/-:
(description and provenance of datasets)
| Rv0079/- | Rv2474c/- | |
| Fe_supp_jason_reseq | 0.786 | -1.07 |
| low_pH_jason_reseq | -0.656 | 1.491 |
| NO_jason_reseq | -3.499 | -4.949 |
| B6_jason_reseq | -0.146 | -2.511 |
| MHCII_jason_reseq | -0.022 | -1.549 |
| Isoniazid02 | -0.172 | 2.023 |
| Rifampicin4 | 0.295 | 0.133 |
| Ethambutol3 | -0.063 | -0.062 |
| Meropenem3 | 0.273 | -0.558 |
| Vancomycin16 | 0.289 | 0.608 |
| Rv2680_day32 | -1.975 | -2.225 |
| H37Rv_KO_MarP | 0.454 | -0.34 |
| hypoxia_3wks | -1.667 | -0.411 |
| hypoxia_6wks | 0.155 | 0.814 |
| glycerol | 0.554 | -0.186 |
| cholesterol | 0.54 | -0.359 |
| AJ | -0.837 | -3.466 |
| Bibs02 | -0.076 | -1.298 |
| Bibs02c | 0.265 | -3.259 |
| BL6 | -1.84 | -2.563 |
| BL6a | -1.356 | -3.514 |
| BXD01 | -1.657 | -2.668 |
| BXD010 | -1.017 | -2.624 |
| BXD011 | -2.414 | -2.609 |
| BXD03 | -0.69 | -2.77 |
| BXD04 | -1.119 | -2.533 |
| BXD05 | -1.056 | -2.757 |
| BXD06 | -1.678 | -2.601 |
| BXD07 | -0.972 | -2.837 |
| BXD08 | -1.957 | -2.725 |
| BXD09 | -1.809 | -2.879 |
| CAST | 0.245 | -2.074 |
| CCcont | -0.948 | -1.017 |
| DS01 | -0.763 | -3.006 |
| DS02 | -0.651 | -1.884 |
| DS04 | -0.534 | -2.469 |
| DS0c | -0.636 | -0.706 |
| GP01 | -0.476 | -2.023 |
| GP02 | -1.224 | -1.705 |
| GP0c | -0.846 | -2.664 |
| NOD | 0.988 | -1.289 |
| NZO | -0.597 | -3.241 |
| PWK | -0.165 | -1.177 |
| H37Rv_KO_CtpC | -1.004 | -2.53 |
| H37Rv_KO_CtpD | -0.481 | -0.863 |
| H37Rv_KO_Rv1272 | -0.406 | -2.62 |
| H37Rv_KO_SugABC | -0.436 | -1.757 |
| H37Rv_KO_MbtN | -0.723 | -1.749 |
| Trans05 | -1.393 | -1.952 |
| macrophage_unactivated | -2.326 | -4.744 |
| IL1 | -1.326 | -4.458 |
| Rapamycin | -1.43 | -4.612 |
| Tcell | -2.998 | -3.848 |
| GMCSF | -2.36 | -3.662 |
| IFNab | -1.862 | -4.193 |
| IFNg | -4.022 | -4.017 |
| IFNg_GMCSF1 | -3.098 | -4.723 |
| Rv1432_day32 | -0.272 | 0.0 |
| Rv1565c_day32 | 0.986 | -1.703 |
| secA2_input | 0.0 | -0.348 |
| delta_Rv3594 | 0.815 | 0.428 |
| delta_Rv3717 | -0.327 | -0.438 |
| delta_Rv3811 | 0.433 | -0.518 |
| delta_Rv0954 | 1.545 | 1.91 |
| PonA1 | 0.795 | 2.086 |
| EccD1_KO | -0.148 | -0.296 |
| EspI_KO | -0.148 | 0.582 |
| PE35_KO | -1.009 | 1.397 |
| PPE68_KO | -0.598 | 1.43 |
| glycerol2 | 0.427 | 1.794 |
| lignocerate | 0.111 | 1.845 |
| oleate | -0.403 | 0.625 |
| phosphatidylcholine | 0.232 | 1.541 |
| acetate | 0.223 | 1.983 |
| glucAc | 0.99 | 1.806 |
| Rv0950ko | 0.703 | -0.691 |
| Rv1096ko | 1.188 | -1.004 |
| Rv3684ko | 0.364 | 1.11 |
| delta_otsA_trehalose | 0.386 | 0.0 |