Top 10 genes with highest correlation to Rv0075/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1156/- | (cc=0.5369) | info on Rv1156/- |
| Rv0840c/pip | (cc=0.5237) | info on Rv0840c/pip |
| Rv0218/- | (cc=0.5207) | info on Rv0218/- |
| Rv0674/- | (cc=0.5135) | info on Rv0674/- |
| Rv1367c/- | (cc=0.5062) | info on Rv1367c/- |
| Rv2232/ptkA | (cc=0.5018) | info on Rv2232/ptkA |
| Rv1368/lprF | (cc=0.4952) | info on Rv1368/lprF |
| Rv0846c/- | (cc=0.4937) | info on Rv0846c/- |
| Rv0359/- | (cc=0.4924) | info on Rv0359/- |
| Rv1105/- | (cc=0.4913) | info on Rv1105/- |
Correlation of Rv0075/- with Rv2232/ptkA
Normalized LFCs for Rv0075/-:
(description and provenance of datasets)
| Rv0075/- | Rv2232/ptkA | |
| Fe_supp_jason_reseq | -0.153 | -1.782 |
| low_pH_jason_reseq | -0.447 | -0.626 |
| NO_jason_reseq | 0.097 | 0.108 |
| B6_jason_reseq | 0.662 | 0.489 |
| MHCII_jason_reseq | 1.083 | 1.444 |
| Isoniazid02 | 0.825 | 0.455 |
| Rifampicin4 | 0.265 | -0.439 |
| Ethambutol3 | 1.492 | 0.638 |
| Meropenem3 | -0.273 | 1.542 |
| Vancomycin16 | -0.348 | -0.43 |
| Rv2680_day32 | -0.169 | 0.947 |
| H37Rv_KO_MarP | 0.46 | 1.226 |
| hypoxia_3wks | 0.255 | 0.112 |
| hypoxia_6wks | 0.75 | -0.311 |
| glycerol | -0.285 | 1.271 |
| cholesterol | 0.12 | 0.0 |
| AJ | -0.222 | 0.156 |
| Bibs02 | 0.481 | 0.588 |
| Bibs02c | 0.432 | 1.441 |
| BL6 | -0.236 | -2.396 |
| BL6a | 0.192 | 0.209 |
| BXD01 | -0.007 | -0.608 |
| BXD010 | -0.372 | -1.641 |
| BXD011 | -0.143 | -0.741 |
| BXD03 | -0.42 | -2.017 |
| BXD04 | -0.271 | 0.131 |
| BXD05 | -0.077 | -0.462 |
| BXD06 | 0.178 | -0.335 |
| BXD07 | -0.204 | -0.448 |
| BXD08 | -0.3 | -0.357 |
| BXD09 | -0.044 | -1.346 |
| CAST | 0.012 | 0.517 |
| CCcont | -0.505 | -2.063 |
| DS01 | 0.477 | 0.71 |
| DS02 | 0.022 | 0.654 |
| DS04 | 0.88 | 0.583 |
| DS0c | 0.83 | 0.06 |
| GP01 | -0.328 | -0.164 |
| GP02 | 1.227 | 0.648 |
| GP0c | -0.544 | -0.421 |
| NOD | 0.573 | 0.604 |
| NZO | -0.082 | 0.309 |
| PWK | -0.199 | -0.492 |
| H37Rv_KO_CtpC | -0.346 | -0.466 |
| H37Rv_KO_CtpD | 0.099 | -1.686 |
| H37Rv_KO_Rv1272 | 0.103 | -0.257 |
| H37Rv_KO_SugABC | -0.301 | 0.529 |
| H37Rv_KO_MbtN | -0.8 | -1.024 |
| Trans05 | 0.059 | -2.026 |
| macrophage_unactivated | -0.846 | -3.592 |
| IL1 | -0.392 | -4.547 |
| Rapamycin | 0.025 | -3.67 |
| Tcell | -0.14 | -2.401 |
| GMCSF | -0.576 | -2.572 |
| IFNab | -0.659 | -2.098 |
| IFNg | -0.329 | -2.603 |
| IFNg_GMCSF1 | -0.625 | -2.181 |
| Rv1432_day32 | -0.24 | 1.119 |
| Rv1565c_day32 | -0.324 | -0.24 |
| secA2_input | 0.412 | 0.969 |
| delta_Rv3594 | -0.875 | -1.048 |
| delta_Rv3717 | -0.357 | -0.394 |
| delta_Rv3811 | -0.669 | -0.498 |
| delta_Rv0954 | -0.199 | -1.16 |
| PonA1 | -0.28 | 0.227 |
| EccD1_KO | 0.086 | -0.388 |
| EspI_KO | 0.245 | 1.8 |
| PE35_KO | -0.026 | -0.254 |
| PPE68_KO | 0.355 | 0.749 |
| glycerol2 | -0.024 | -1.354 |
| lignocerate | -0.094 | -1.695 |
| oleate | 0.047 | -0.315 |
| phosphatidylcholine | -0.221 | -1.217 |
| acetate | -0.128 | -1.445 |
| glucAc | -0.542 | -1.306 |
| Rv0950ko | -0.431 | 0.078 |
| Rv1096ko | -0.486 | -0.793 |
| Rv3684ko | -0.141 | 0.0 |
| delta_otsA_trehalose | -0.064 | 0.83 |