Top 10 genes with highest correlation to Rv0075/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1156/- | (cc=0.5369) | info on Rv1156/- |
| Rv0840c/pip | (cc=0.5237) | info on Rv0840c/pip |
| Rv0218/- | (cc=0.5207) | info on Rv0218/- |
| Rv0674/- | (cc=0.5135) | info on Rv0674/- |
| Rv1367c/- | (cc=0.5062) | info on Rv1367c/- |
| Rv2232/ptkA | (cc=0.5018) | info on Rv2232/ptkA |
| Rv1368/lprF | (cc=0.4952) | info on Rv1368/lprF |
| Rv0846c/- | (cc=0.4937) | info on Rv0846c/- |
| Rv0359/- | (cc=0.4924) | info on Rv0359/- |
| Rv1105/- | (cc=0.4913) | info on Rv1105/- |
Correlation of Rv0075/- with Rv1368/lprF
Normalized LFCs for Rv0075/-:
(description and provenance of datasets)
| Rv0075/- | Rv1368/lprF | |
| Fe_supp_jason_reseq | -0.153 | -0.556 |
| low_pH_jason_reseq | -0.447 | -0.765 |
| NO_jason_reseq | 0.097 | -0.591 |
| B6_jason_reseq | 0.662 | -0.149 |
| MHCII_jason_reseq | 1.083 | 0.204 |
| Isoniazid02 | 0.825 | -0.076 |
| Rifampicin4 | 0.265 | -0.271 |
| Ethambutol3 | 1.492 | 1.941 |
| Meropenem3 | -0.273 | 0.092 |
| Vancomycin16 | -0.348 | -0.281 |
| Rv2680_day32 | -0.169 | 0.775 |
| H37Rv_KO_MarP | 0.46 | 0.569 |
| hypoxia_3wks | 0.255 | -0.295 |
| hypoxia_6wks | 0.75 | 0.374 |
| glycerol | -0.285 | 0.429 |
| cholesterol | 0.12 | 1.809 |
| AJ | -0.222 | 0.408 |
| Bibs02 | 0.481 | 1.551 |
| Bibs02c | 0.432 | 0.653 |
| BL6 | -0.236 | -0.038 |
| BL6a | 0.192 | 0.102 |
| BXD01 | -0.007 | -0.332 |
| BXD010 | -0.372 | -0.057 |
| BXD011 | -0.143 | 0.161 |
| BXD03 | -0.42 | 0.171 |
| BXD04 | -0.271 | -0.436 |
| BXD05 | -0.077 | -0.102 |
| BXD06 | 0.178 | -0.279 |
| BXD07 | -0.204 | -0.175 |
| BXD08 | -0.3 | -0.403 |
| BXD09 | -0.044 | 0.035 |
| CAST | 0.012 | -0.215 |
| CCcont | -0.505 | -0.475 |
| DS01 | 0.477 | 0.488 |
| DS02 | 0.022 | -0.016 |
| DS04 | 0.88 | 1.112 |
| DS0c | 0.83 | 0.666 |
| GP01 | -0.328 | -0.466 |
| GP02 | 1.227 | 1.049 |
| GP0c | -0.544 | -0.335 |
| NOD | 0.573 | 0.788 |
| NZO | -0.082 | -0.065 |
| PWK | -0.199 | 0.192 |
| H37Rv_KO_CtpC | -0.346 | 0.345 |
| H37Rv_KO_CtpD | 0.099 | 0.043 |
| H37Rv_KO_Rv1272 | 0.103 | -0.943 |
| H37Rv_KO_SugABC | -0.301 | -0.919 |
| H37Rv_KO_MbtN | -0.8 | 0.053 |
| Trans05 | 0.059 | -0.483 |
| macrophage_unactivated | -0.846 | -0.499 |
| IL1 | -0.392 | 0.294 |
| Rapamycin | 0.025 | -0.347 |
| Tcell | -0.14 | -1.095 |
| GMCSF | -0.576 | -0.855 |
| IFNab | -0.659 | -0.063 |
| IFNg | -0.329 | -0.131 |
| IFNg_GMCSF1 | -0.625 | -0.393 |
| Rv1432_day32 | -0.24 | 0.056 |
| Rv1565c_day32 | -0.324 | -1.218 |
| secA2_input | 0.412 | -0.136 |
| delta_Rv3594 | -0.875 | -0.479 |
| delta_Rv3717 | -0.357 | -0.273 |
| delta_Rv3811 | -0.669 | -0.802 |
| delta_Rv0954 | -0.199 | 0.983 |
| PonA1 | -0.28 | -0.63 |
| EccD1_KO | 0.086 | -0.062 |
| EspI_KO | 0.245 | 0.231 |
| PE35_KO | -0.026 | 0.053 |
| PPE68_KO | 0.355 | -0.323 |
| glycerol2 | -0.024 | -0.741 |
| lignocerate | -0.094 | -0.74 |
| oleate | 0.047 | -0.805 |
| phosphatidylcholine | -0.221 | -0.756 |
| acetate | -0.128 | -0.603 |
| glucAc | -0.542 | -0.491 |
| Rv0950ko | -0.431 | 0.877 |
| Rv1096ko | -0.486 | 0.449 |
| Rv3684ko | -0.141 | 0.36 |
| delta_otsA_trehalose | -0.064 | 0.269 |