Top 10 genes with highest correlation to Rv0072/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3156/nuoL | (cc=0.5911) | info on Rv3156/nuoL |
| Rv0260c/- | (cc=0.5906) | info on Rv0260c/- |
| Rv1500/- | (cc=0.5792) | info on Rv1500/- |
| Rv1917c/PPE34 | (cc=0.569) | info on Rv1917c/PPE34 |
| Rv3429/PPE59 | (cc=0.5667) | info on Rv3429/PPE59 |
| Rv3487c/lipF | (cc=0.5657) | info on Rv3487c/lipF |
| Rv2430c/PPE41 | (cc=0.5657) | info on Rv2430c/PPE41 |
| Rv0059/- | (cc=0.5612) | info on Rv0059/- |
| Rv3142c/- | (cc=0.5593) | info on Rv3142c/- |
| Rv2107/PE22 | (cc=0.5398) | info on Rv2107/PE22 |
Correlation of Rv0072/- with Rv2430c/PPE41
Normalized LFCs for Rv0072/-:
(description and provenance of datasets)
| Rv0072/- | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | -0.362 | -0.259 |
| low_pH_jason_reseq | -0.049 | -0.617 |
| NO_jason_reseq | 0.0 | -0.326 |
| B6_jason_reseq | -0.064 | -0.565 |
| MHCII_jason_reseq | -0.69 | -1.222 |
| Isoniazid02 | -1.484 | -0.362 |
| Rifampicin4 | 0.225 | -0.379 |
| Ethambutol3 | 1.0 | -0.539 |
| Meropenem3 | 0.265 | 0.604 |
| Vancomycin16 | -1.013 | -0.541 |
| Rv2680_day32 | -0.869 | -0.546 |
| H37Rv_KO_MarP | 0.49 | 0.78 |
| hypoxia_3wks | -0.546 | -0.016 |
| hypoxia_6wks | -0.194 | -0.558 |
| glycerol | -0.279 | -1.482 |
| cholesterol | 0.012 | -0.355 |
| AJ | 0.24 | 1.329 |
| Bibs02 | 0.84 | 0.293 |
| Bibs02c | 0.791 | -0.441 |
| BL6 | 0.855 | 2.014 |
| BL6a | 0.816 | 1.624 |
| BXD01 | 0.493 | 1.73 |
| BXD010 | 0.642 | 2.268 |
| BXD011 | 0.508 | 2.003 |
| BXD03 | 0.366 | 2.085 |
| BXD04 | 0.45 | 2.116 |
| BXD05 | 0.87 | 2.269 |
| BXD06 | 0.744 | 1.836 |
| BXD07 | 0.723 | 1.829 |
| BXD08 | 0.582 | 1.59 |
| BXD09 | 0.086 | 1.891 |
| CAST | 0.47 | 1.024 |
| CCcont | 0.543 | 1.659 |
| DS01 | 1.047 | 1.092 |
| DS02 | -0.112 | 0.558 |
| DS04 | 1.737 | 0.769 |
| DS0c | 0.559 | 0.509 |
| GP01 | 0.569 | 0.134 |
| GP02 | 0.645 | 2.462 |
| GP0c | 0.418 | 0.343 |
| NOD | 0.111 | 1.447 |
| NZO | -0.354 | 0.483 |
| PWK | 0.539 | 0.872 |
| H37Rv_KO_CtpC | 0.552 | 0.914 |
| H37Rv_KO_CtpD | 1.424 | 1.252 |
| H37Rv_KO_Rv1272 | 1.122 | 1.399 |
| H37Rv_KO_SugABC | 0.979 | 1.91 |
| H37Rv_KO_MbtN | 0.703 | 1.129 |
| Trans05 | 1.394 | 2.226 |
| macrophage_unactivated | 0.114 | 1.076 |
| IL1 | 0.119 | 0.125 |
| Rapamycin | -0.043 | 0.19 |
| Tcell | 0.489 | 0.094 |
| GMCSF | -0.388 | 0.636 |
| IFNab | 0.16 | 0.308 |
| IFNg | 0.246 | 0.537 |
| IFNg_GMCSF1 | -0.145 | 0.688 |
| Rv1432_day32 | 0.263 | -0.428 |
| Rv1565c_day32 | 0.896 | 0.782 |
| secA2_input | -0.762 | -0.891 |
| delta_Rv3594 | -0.174 | -0.571 |
| delta_Rv3717 | -0.366 | -1.178 |
| delta_Rv3811 | -0.277 | -0.265 |
| delta_Rv0954 | -0.674 | -1.172 |
| PonA1 | 0.005 | -0.066 |
| EccD1_KO | -0.391 | -0.625 |
| EspI_KO | -0.094 | -0.331 |
| PE35_KO | -0.335 | -0.726 |
| PPE68_KO | -0.259 | -0.701 |
| glycerol2 | 1.003 | -0.084 |
| lignocerate | 1.056 | -0.073 |
| oleate | 1.041 | 0.234 |
| phosphatidylcholine | 0.473 | 0.041 |
| acetate | 0.336 | 0.017 |
| glucAc | 0.188 | -0.627 |
| Rv0950ko | 0.078 | -0.136 |
| Rv1096ko | -0.181 | -0.22 |
| Rv3684ko | -0.468 | -0.508 |
| delta_otsA_trehalose | -0.703 | 1.428 |