Top 10 genes with highest correlation to Rv0072/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3156/nuoL | (cc=0.5911) | info on Rv3156/nuoL |
| Rv0260c/- | (cc=0.5906) | info on Rv0260c/- |
| Rv1500/- | (cc=0.5792) | info on Rv1500/- |
| Rv1917c/PPE34 | (cc=0.569) | info on Rv1917c/PPE34 |
| Rv3429/PPE59 | (cc=0.5667) | info on Rv3429/PPE59 |
| Rv3487c/lipF | (cc=0.5657) | info on Rv3487c/lipF |
| Rv2430c/PPE41 | (cc=0.5657) | info on Rv2430c/PPE41 |
| Rv0059/- | (cc=0.5612) | info on Rv0059/- |
| Rv3142c/- | (cc=0.5593) | info on Rv3142c/- |
| Rv2107/PE22 | (cc=0.5398) | info on Rv2107/PE22 |
Correlation of Rv0072/- with Rv3156/nuoL
Normalized LFCs for Rv0072/-:
(description and provenance of datasets)
| Rv0072/- | Rv3156/nuoL | |
| Fe_supp_jason_reseq | -0.362 | -0.41 |
| low_pH_jason_reseq | -0.049 | -1.186 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | -0.064 | -0.787 |
| MHCII_jason_reseq | -0.69 | -0.544 |
| Isoniazid02 | -1.484 | -1.825 |
| Rifampicin4 | 0.225 | 1.021 |
| Ethambutol3 | 1.0 | -0.621 |
| Meropenem3 | 0.265 | -0.673 |
| Vancomycin16 | -1.013 | -0.223 |
| Rv2680_day32 | -0.869 | -0.524 |
| H37Rv_KO_MarP | 0.49 | -0.387 |
| hypoxia_3wks | -0.546 | 1.3 |
| hypoxia_6wks | -0.194 | 0.205 |
| glycerol | -0.279 | -0.234 |
| cholesterol | 0.012 | -0.898 |
| AJ | 0.24 | -0.269 |
| Bibs02 | 0.84 | 0.873 |
| Bibs02c | 0.791 | 1.105 |
| BL6 | 0.855 | 1.47 |
| BL6a | 0.816 | 1.808 |
| BXD01 | 0.493 | 1.047 |
| BXD010 | 0.642 | 1.308 |
| BXD011 | 0.508 | 1.707 |
| BXD03 | 0.366 | 1.502 |
| BXD04 | 0.45 | 0.693 |
| BXD05 | 0.87 | 1.772 |
| BXD06 | 0.744 | 1.533 |
| BXD07 | 0.723 | 1.371 |
| BXD08 | 0.582 | 1.052 |
| BXD09 | 0.086 | 1.346 |
| CAST | 0.47 | 0.123 |
| CCcont | 0.543 | 0.861 |
| DS01 | 1.047 | 1.169 |
| DS02 | -0.112 | 1.453 |
| DS04 | 1.737 | 1.703 |
| DS0c | 0.559 | 1.285 |
| GP01 | 0.569 | 1.605 |
| GP02 | 0.645 | 1.171 |
| GP0c | 0.418 | 1.551 |
| NOD | 0.111 | 0.867 |
| NZO | -0.354 | -0.055 |
| PWK | 0.539 | -0.29 |
| H37Rv_KO_CtpC | 0.552 | 1.177 |
| H37Rv_KO_CtpD | 1.424 | 2.074 |
| H37Rv_KO_Rv1272 | 1.122 | 1.498 |
| H37Rv_KO_SugABC | 0.979 | 2.384 |
| H37Rv_KO_MbtN | 0.703 | 0.829 |
| Trans05 | 1.394 | 1.208 |
| macrophage_unactivated | 0.114 | -0.316 |
| IL1 | 0.119 | 0.0 |
| Rapamycin | -0.043 | -0.15 |
| Tcell | 0.489 | -0.267 |
| GMCSF | -0.388 | -0.309 |
| IFNab | 0.16 | 0.097 |
| IFNg | 0.246 | 0.126 |
| IFNg_GMCSF1 | -0.145 | -0.314 |
| Rv1432_day32 | 0.263 | 0.134 |
| Rv1565c_day32 | 0.896 | -0.038 |
| secA2_input | -0.762 | -0.565 |
| delta_Rv3594 | -0.174 | 0.087 |
| delta_Rv3717 | -0.366 | 0.269 |
| delta_Rv3811 | -0.277 | -0.149 |
| delta_Rv0954 | -0.674 | 0.211 |
| PonA1 | 0.005 | 0.044 |
| EccD1_KO | -0.391 | -1.02 |
| EspI_KO | -0.094 | -0.884 |
| PE35_KO | -0.335 | -0.33 |
| PPE68_KO | -0.259 | -0.118 |
| glycerol2 | 1.003 | 1.914 |
| lignocerate | 1.056 | -0.852 |
| oleate | 1.041 | 2.375 |
| phosphatidylcholine | 0.473 | -0.744 |
| acetate | 0.336 | 0.572 |
| glucAc | 0.188 | 0.163 |
| Rv0950ko | 0.078 | 0.422 |
| Rv1096ko | -0.181 | 0.636 |
| Rv3684ko | -0.468 | 0.537 |
| delta_otsA_trehalose | -0.703 | 1.21 |