Top 10 genes with highest correlation to Rv0060/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2219/- | (cc=0.5267) | info on Rv2219/- |
Rv0945/- | (cc=0.526) | info on Rv0945/- |
Rv3819/- | (cc=0.5134) | info on Rv3819/- |
Rv2237/- | (cc=0.5052) | info on Rv2237/- |
Rv3224B/- | (cc=0.5046) | info on Rv3224B/- |
Rv3224A/- | (cc=0.5002) | info on Rv3224A/- |
Rv0312/- | (cc=0.4982) | info on Rv0312/- |
Rv1987/- | (cc=0.4959) | info on Rv1987/- |
Rv0887c/- | (cc=0.486) | info on Rv0887c/- |
Rv3217c/- | (cc=0.4839) | info on Rv3217c/- |
Correlation of Rv0060/- with Rv1987/-
Normalized LFCs for Rv0060/-:
(description and provenance of datasets)
Rv0060/- | Rv1987/- | |
Fe_supp_jason_reseq | 0.391 | 0.813 |
low_pH_jason_reseq | -1.134 | -0.965 |
NO_jason_reseq | 0.0 | -0.761 |
B6_jason_reseq | 0.0 | 0.082 |
MHCII_jason_reseq | 0.085 | -0.367 |
Isoniazid02 | 0.263 | -0.346 |
Rifampicin4 | 0.712 | -0.709 |
Ethambutol3 | 0.505 | -0.343 |
Meropenem3 | 0.662 | -0.765 |
Vancomycin16 | 0.48 | -0.053 |
Rv2680_day32 | -0.554 | 0.985 |
H37Rv_KO_MarP | 0.35 | -0.008 |
hypoxia_3wks | -0.606 | -1.025 |
hypoxia_6wks | 0.146 | -0.265 |
glycerol | 0.222 | -0.933 |
cholesterol | 0.0 | -0.517 |
AJ | 0.131 | -0.679 |
Bibs02 | -1.123 | 0.878 |
Bibs02c | 0.629 | 0.697 |
BL6 | 0.53 | 0.885 |
BL6a | 0.595 | 0.422 |
BXD01 | 0.905 | 0.19 |
BXD010 | -0.543 | 0.059 |
BXD011 | 0.268 | 0.262 |
BXD03 | 0.52 | 0.478 |
BXD04 | -0.325 | 0.068 |
BXD05 | 0.216 | 0.698 |
BXD06 | 0.342 | 0.355 |
BXD07 | 0.0 | 0.167 |
BXD08 | 0.0 | 0.438 |
BXD09 | -0.173 | 0.363 |
CAST | 0.976 | -0.289 |
CCcont | 1.498 | 1.188 |
DS01 | -0.45 | 0.183 |
DS02 | 1.235 | -0.072 |
DS04 | 0.312 | 0.572 |
DS0c | -0.737 | -0.083 |
GP01 | 0.056 | 0.187 |
GP02 | -0.283 | -0.69 |
GP0c | 0.942 | -0.935 |
NOD | 0.0 | -0.295 |
NZO | 0.6 | -0.767 |
PWK | 0.905 | -0.163 |
H37Rv_KO_CtpC | 0.977 | 0.154 |
H37Rv_KO_CtpD | 0.989 | 1.731 |
H37Rv_KO_Rv1272 | 0.227 | 0.848 |
H37Rv_KO_SugABC | 0.877 | 1.386 |
H37Rv_KO_MbtN | -0.633 | -0.315 |
Trans05 | -0.554 | 0.03 |
macrophage_unactivated | 1.531 | 0.265 |
IL1 | -0.297 | 0.409 |
Rapamycin | 0.0 | 0.69 |
Tcell | 1.352 | -0.541 |
GMCSF | -0.264 | 0.393 |
IFNab | 0.0 | 0.242 |
IFNg | -0.551 | 0.398 |
IFNg_GMCSF1 | -0.314 | 0.795 |
Rv1432_day32 | 0.0 | 0.194 |
Rv1565c_day32 | -0.218 | 0.117 |
secA2_input | 0.812 | -0.418 |
delta_Rv3594 | 0.961 | 1.086 |
delta_Rv3717 | 1.851 | 0.703 |
delta_Rv3811 | 1.335 | 0.747 |
delta_Rv0954 | 0.0 | 1.417 |
PonA1 | -0.245 | -0.212 |
EccD1_KO | 0.582 | -0.615 |
EspI_KO | -0.787 | -0.331 |
PE35_KO | -0.589 | -0.079 |
PPE68_KO | -1.133 | 0.214 |
glycerol2 | 1.964 | 2.285 |
lignocerate | 2.404 | 2.814 |
oleate | -0.688 | -1.163 |
phosphatidylcholine | 1.909 | 2.129 |
acetate | 2.128 | 2.72 |
glucAc | 1.868 | 2.553 |
Rv0950ko | 0.639 | 0.033 |
Rv1096ko | 1.194 | -0.549 |
Rv3684ko | 0.0 | -0.416 |
delta_otsA_trehalose | 0.366 | 0.021 |