Top 10 genes with highest correlation to Rv0010c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3482c/- | (cc=0.6791) | info on Rv3482c/- |
| Rv1323/fadA4 | (cc=0.6436) | info on Rv1323/fadA4 |
| Rv3737/- | (cc=0.6117) | info on Rv3737/- |
| Rv3480c/- | (cc=0.5901) | info on Rv3480c/- |
| Rv0965c/- | (cc=0.5745) | info on Rv0965c/- |
| Rv0470A/- | (cc=0.573) | info on Rv0470A/- |
| Rv1731/gabD2 | (cc=0.5711) | info on Rv1731/gabD2 |
| Rv0758/phoR | (cc=0.555) | info on Rv0758/phoR |
| Rv1192/- | (cc=0.5455) | info on Rv1192/- |
| Rv3037c/- | (cc=0.5419) | info on Rv3037c/- |
Correlation of Rv0010c/- with Rv3482c/-
Normalized LFCs for Rv0010c/-:
(description and provenance of datasets)
| Rv0010c/- | Rv3482c/- | |
| Fe_supp_jason_reseq | 1.301 | 0.543 |
| low_pH_jason_reseq | -0.517 | -1.541 |
| NO_jason_reseq | -0.289 | -0.218 |
| B6_jason_reseq | 0.181 | 0.878 |
| MHCII_jason_reseq | 1.209 | 1.276 |
| Isoniazid02 | 0.604 | 0.618 |
| Rifampicin4 | 0.62 | 0.079 |
| Ethambutol3 | 0.82 | 1.654 |
| Meropenem3 | 0.0 | 0.551 |
| Vancomycin16 | 0.769 | 0.56 |
| Rv2680_day32 | -0.234 | -0.738 |
| H37Rv_KO_MarP | 0.892 | 0.226 |
| hypoxia_3wks | -0.933 | -0.323 |
| hypoxia_6wks | -0.597 | 0.106 |
| glycerol | -0.148 | 0.177 |
| cholesterol | -0.168 | -0.377 |
| AJ | -2.141 | -0.928 |
| Bibs02 | 0.374 | 0.008 |
| Bibs02c | -0.227 | 0.291 |
| BL6 | -1.154 | -0.82 |
| BL6a | -1.385 | -0.484 |
| BXD01 | -1.521 | -0.936 |
| BXD010 | -0.176 | -1.38 |
| BXD011 | -0.515 | -1.176 |
| BXD03 | -2.126 | -0.528 |
| BXD04 | -0.703 | -0.672 |
| BXD05 | -1.572 | -0.741 |
| BXD06 | -1.038 | -1.019 |
| BXD07 | -1.215 | -0.989 |
| BXD08 | -2.052 | -1.268 |
| BXD09 | -0.738 | -0.954 |
| CAST | -1.361 | -1.069 |
| CCcont | -1.062 | -0.282 |
| DS01 | -0.125 | 0.118 |
| DS02 | 0.49 | -0.013 |
| DS04 | -0.297 | 0.195 |
| DS0c | -0.38 | 0.437 |
| GP01 | -1.322 | -1.843 |
| GP02 | -2.129 | -1.339 |
| GP0c | -1.771 | -1.004 |
| NOD | -0.516 | 0.133 |
| NZO | -1.248 | -1.063 |
| PWK | -1.937 | -0.561 |
| H37Rv_KO_CtpC | -0.235 | -1.153 |
| H37Rv_KO_CtpD | 0.176 | -0.654 |
| H37Rv_KO_Rv1272 | -1.392 | -1.053 |
| H37Rv_KO_SugABC | -0.586 | -0.183 |
| H37Rv_KO_MbtN | -0.774 | -0.656 |
| Trans05 | -1.91 | -0.866 |
| macrophage_unactivated | -0.259 | -0.357 |
| IL1 | -0.196 | -0.3 |
| Rapamycin | -0.359 | 0.261 |
| Tcell | -0.919 | -0.052 |
| GMCSF | -1.125 | 0.209 |
| IFNab | -0.68 | -0.342 |
| IFNg | -0.454 | -0.013 |
| IFNg_GMCSF1 | -0.534 | -0.016 |
| Rv1432_day32 | -0.626 | -0.18 |
| Rv1565c_day32 | -0.855 | -0.313 |
| secA2_input | 0.338 | 0.304 |
| delta_Rv3594 | -0.694 | 0.381 |
| delta_Rv3717 | -0.493 | 0.235 |
| delta_Rv3811 | 0.486 | 0.128 |
| delta_Rv0954 | 1.372 | -0.08 |
| PonA1 | 0.604 | 0.578 |
| EccD1_KO | -0.786 | -0.171 |
| EspI_KO | -1.084 | -0.148 |
| PE35_KO | -0.697 | -0.28 |
| PPE68_KO | -0.352 | 0.08 |
| glycerol2 | 0.521 | 0.846 |
| lignocerate | 0.075 | 1.085 |
| oleate | 0.2 | 0.096 |
| phosphatidylcholine | 0.675 | 1.088 |
| acetate | -0.465 | 0.316 |
| glucAc | -0.616 | 0.38 |
| Rv0950ko | 0.787 | 0.458 |
| Rv1096ko | 0.721 | 0.157 |
| Rv3684ko | 0.406 | -0.491 |
| delta_otsA_trehalose | -1.544 | -1.133 |